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SCN18_30_10_14_R3_B_scaffold_745_24

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(21526..22803)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V754_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 425.0
  • Bit_score: 821
  • Evalue 2.50e-235
Aliphatic amidase expression-regulating protein {ECO:0000313|EMBL:CEG09461.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 425.0
  • Bit_score: 821
  • Evalue 3.50e-235
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 426.0
  • Bit_score: 563
  • Evalue 3.50e-158

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGGCCAAGAAAATTTCGCGCCGCAGCTTCCTCGAATGTGCGCTCGCAGGCGGCGCGGCGGCTGGCACGGCAAACCTCACCATCATGAAGGATGCGTTCGCGCAGGCTTCCGGGCCGATCGTGATCGGCCATCATTGCGACCTCACCGGCGTGATCTCGTCATGGGGCGTCTGGCATGACAAATGCGCCCGCGCCGCGGTTGACGTCATCAATCAGGGCGGCGGCATCGCCGGGCGCAAGGTCGAGCTCGCGACCGAGGACACCGAGTCGAATCCGGCCAGCGGCGCGCGCAAGCTGCGCAACCTGATCCAGCGCGCCAATGCCGAATTCGTCATCGGCTCGGTGCATTCCGGGGTGATGCTGGCGGCGATCCCGATCGCATCCGAACTCAAGACCATCTACTTCTCCACCGGCGAAGCGACGGAGGCGACCGGCGCCAAGGGGACGCGCTATTCGTTCCGCACCGGCACCGACACCTATTCGATCGCGGCGGCGAGCATGCCCTGGTGTGTCGAGAATTTCGGCAAGGTATGGACGATCATTTACGCCGATTACGCCTGGGGTCAGAGCACCAATCAGGAATCGCGTCATTTCATCGAGAAGGCAGGCGGCAAGATTCTCAACAGCATCGCGGTGCCGCTCGATACCAAGGATTTCGTGCCGTATCTGGCGCAGATCTCCGCCGACACCGAAGTGCTGCTGCCGGCCTTCATCGGCTCCCTGTCGCTCGGTTTTTATACCCAGGCTAAGAGCATGGGCCTCGACAAGAAGATGAAGATGTTCTCCTCGTCGGCCAGCATCGAGTCGATCGCGCCGGACGACATCCAGGGTGCGGCTGAGGGCGTCTACTTCTTCGAGAACTTCCCGCGCATGCTGAGCTCGAAGAACGACGAGTACCACAAGGAGTTCAACAAGCGTCTGCAGATCGATGACGTCGATGCGCGTCAAGTCGGCGGCACCGCGGTGATGGACAAGAGCCATTGCTGGCAGGCGTGGGAGGATATCTTCGCGATCAAGCAGGCGATCGAGAAGTCGGGCTACAAGACCCGCAAGGACATCCAGGGCGTGATCGAGGCGCTTGAAGGCATGGAGATGAAGAATTCCATCGGCCATCCGCAGGGCGACAAGATCATCCGCAAGGAAGATCATGCCGGCGTCATCGATTGCTACATCAGCCGGGTCGTCAACGGCAAGCTGACGCTGCAGAAGCGGATTCCGAAGGAAGATCTGTTGAAGAACATGCCGGTCCGCCACAATTTGTCGGCGATGCCGGTTTGA
PROTEIN sequence
Length: 426
MAKKISRRSFLECALAGGAAAGTANLTIMKDAFAQASGPIVIGHHCDLTGVISSWGVWHDKCARAAVDVINQGGGIAGRKVELATEDTESNPASGARKLRNLIQRANAEFVIGSVHSGVMLAAIPIASELKTIYFSTGEATEATGAKGTRYSFRTGTDTYSIAAASMPWCVENFGKVWTIIYADYAWGQSTNQESRHFIEKAGGKILNSIAVPLDTKDFVPYLAQISADTEVLLPAFIGSLSLGFYTQAKSMGLDKKMKMFSSSASIESIAPDDIQGAAEGVYFFENFPRMLSSKNDEYHKEFNKRLQIDDVDARQVGGTAVMDKSHCWQAWEDIFAIKQAIEKSGYKTRKDIQGVIEALEGMEMKNSIGHPQGDKIIRKEDHAGVIDCYISRVVNGKLTLQKRIPKEDLLKNMPVRHNLSAMPV*