ggKbase home page

SCN18_30_10_14_R3_B_scaffold_745_26

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(23517..24296)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V752_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 259.0
  • Bit_score: 431
  • Evalue 4.40e-118
Lipopolysaccharide export system ATP-binding protein LptB {ECO:0000313|EMBL:CEG09463.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 259.0
  • Bit_score: 431
  • Evalue 6.20e-118
ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 249.0
  • Bit_score: 273
  • Evalue 4.40e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGAGCGAGCCGATCCTGCGCACCGAGAAGCTGACCAAGACCTTCGGCGGTCTGACGGCGACCGACAATCTCACCCTCAGCCTGCCGAGCGGCCGCCTGCAGGCGATCATCGGTCCGAACGGGGCTGGCAAGACCACGCTGTTCAATCTGATCTCCGGCCTGCTCAAGGCCGACAGCGGCCGGGTGTACTTCCGCGAGCGCGATATCACCGGCCTGCGCCCGCATGAAATCAGCCGACTCGGCATCAAGCGGACCATGCAGATCAAGAGCGTCTTCAACCAGCTCAGCGTGATGGAGAACCTCTGGGTCACGCGGCAGTCGGCGCAGCGCTTCCTGCATCCGTTCCGCTCGGCGATCAACGATAAAGAAACCAGCGAGCGGGTCGATCAGATTCTCGAAGAGATCGGCATGACTGCGCTCGCCAAGCGGATTGCCGGAACGCTGTCCTATGGTGACGTGGCGATGCTCGAAATCGGCATGGCGCTGATCTCCGAGCCGCGCCTGTTGCTGCTCGACGAGCCGATCTGCGGCATGAGTCCGGCCGAGACCGAGCGCGCCGTGGCAAAGATTCGCGAACTGGCGCGCAAGGTGGATATCATCATCATCGAACACGACATGGAGGTGGTGTTCGGCCTTGCCGAGGACATCACCGTGCTGGCACAAGGCGCCATTCTGGCCACTGGCAGCCCGCAGGATATCTCCAACAACGAACAGGTGCGCGAAGCCTATCTGGGCCGCCCCGAGGACGAAGATTACCTCGAAGAGGCCGCCCATGCTTAA
PROTEIN sequence
Length: 260
MSEPILRTEKLTKTFGGLTATDNLTLSLPSGRLQAIIGPNGAGKTTLFNLISGLLKADSGRVYFRERDITGLRPHEISRLGIKRTMQIKSVFNQLSVMENLWVTRQSAQRFLHPFRSAINDKETSERVDQILEEIGMTALAKRIAGTLSYGDVAMLEIGMALISEPRLLLLDEPICGMSPAETERAVAKIRELARKVDIIIIEHDMEVVFGLAEDITVLAQGAILATGSPQDISNNEQVREAYLGRPEDEDYLEEAAHA*