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SCN18_30_10_14_R3_B_scaffold_745_29

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(26698..27606)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L15 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6F7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 298.0
  • Bit_score: 397
  • Evalue 6.30e-108
LysR family transcriptional regulator {ECO:0000313|EMBL:KJC54403.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 301.0
  • Bit_score: 404
  • Evalue 1.20e-109
transcriptional regulatory protein LysR family similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 298.0
  • Bit_score: 354
  • Evalue 2.30e-95

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGCCGATCAGTTTCGAATCCATCGACTGGGACGATCTTCGCGTGTTTCTGTATGCGGCGAGAACCGGCAGCCTGTCGCAGGCCGCGCGGCGACTGCAGATCGACCATTCGACGGTCAGCCGTCGCATTGCACAACTCGAGGCATCAATTGGTTCGGCGCTGCTGACGCGCCAGCGTTCCGGCCTCAAGCTCAACGATATCGGCGAACTGCTGCTGCGCCATGCCGAGAAGATGGAAAGCGCCGTCGTCTCCTTTCACGAGGAGTTCAATGCCGACAAGGCGCTGGTCTCCGGCCATGTCCGGCTTGCGACCATGGAGGGAATCGCCTCGCTCTATATCGCCGAGCGCTGCATCGACTTGAAGAAAACCGCGCCCGGCGTGACCCTGGAACTCGTGACCTCGCCGCAGACCATTCATGTCAATCGGCGCGAGGCAGACCTCTTTCTGGGCTTTTTCAAGCCGGTGGGACAGGGCCTCATTTCGGAGAAGATTGGAAGTTTCCGTTTGTCGCTTTACGCCTCACGCGCCTATCTCGACAAACATGGTACGCCGACAAGCCTGTCAGATCTGCAGAACCATGTGTTCGTGTCCTACATCGAGGACCTGATTCTGGTGGATGCGGTGCGTTGGCTCACCGAAGTGGTGGAGGCGCCGACGGTGGTTTTCCATTCCAACAGCATGATCGCGCAGATGGGCGCTGCGGCGGGCGGACTTGGCATTGTTTTCCTGCCGACCTTCTCCGTCTCCCGGCATCCCGATCTCATTCCTGTTCTGCCCGACAGCGTGACGGCCACCCGCGAGGTCTGGCTCAACGTGCATAACGACCTGCAATTTTCGCCGCGCATTCTTGCGGTGCGACAGTTTCTGAAAAATCTGTTCAGGAGCGATCCCGGCATGCAGGCGCTCTAA
PROTEIN sequence
Length: 303
MPISFESIDWDDLRVFLYAARTGSLSQAARRLQIDHSTVSRRIAQLEASIGSALLTRQRSGLKLNDIGELLLRHAEKMESAVVSFHEEFNADKALVSGHVRLATMEGIASLYIAERCIDLKKTAPGVTLELVTSPQTIHVNRREADLFLGFFKPVGQGLISEKIGSFRLSLYASRAYLDKHGTPTSLSDLQNHVFVSYIEDLILVDAVRWLTEVVEAPTVVFHSNSMIAQMGAAAGGLGIVFLPTFSVSRHPDLIPVLPDSVTATREVWLNVHNDLQFSPRILAVRQFLKNLFRSDPGMQAL*