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SCN18_30_10_14_R3_B_scaffold_917_22

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 21180..21722

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 180.0
  • Bit_score: 308
  • Evalue 5.50e-81
def; peptide deformylase Def (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 171.0
  • Bit_score: 298
  • Evalue 8.80e-79
Peptide deformylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4R0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 180.0
  • Bit_score: 308
  • Evalue 3.90e-81

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGGGCCGCGGCCATTACATCGCGGCCATGGCCATTCGCGAAATCATCAGCCTGCCGGACAAGCGCTTGCGGCTTGTCTCCAAACCCGTGGAGCAGGTGACACGGGAAATCCGCACGCTCGCCGACGACATGCTGGAGAGCATGTATGACGCGCCGGGCATCGGGCTTGCCGCCATTCAGTTGGCGGTGCCGCTGCGCCTCGTCACCATGGATCTGTCGAAGAAGGAAGGCGAGACCAACCCGCGCGTCTTCATCAATCCCGAGGTGCTCACCTCGTCGGAGGACTTCTCGGTCTATGAGGAGGGCTGCCTGTCGATCCCCGAATATTACGAGGAGGTCGAGCGGCCGGCGAAGGTGCGCATCCGCTACATGGACCTCGACGGCAAGGTGCATGAGGAAGATGCCGAGGGCCTGTTCGCCACCTGCATCCAGCATGAGATCGACCACCTCAACGGCGTCTTGTTCATCGACTATCTGTCGAAGCTCAAGCGCGACCGGGTGATGAAGAAATTCACCAAGGCCGCACGCCTTGCGGCGAAATAG
PROTEIN sequence
Length: 181
MGRGHYIAAMAIREIISLPDKRLRLVSKPVEQVTREIRTLADDMLESMYDAPGIGLAAIQLAVPLRLVTMDLSKKEGETNPRVFINPEVLTSSEDFSVYEEGCLSIPEYYEEVERPAKVRIRYMDLDGKVHEEDAEGLFATCIQHEIDHLNGVLFIDYLSKLKRDRVMKKFTKAARLAAK*