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SCN18_30_10_14_R3_B_scaffold_936_18

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(16541..17110)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Afipia birgiae RepID=UPI000307BCF9 similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 189.0
  • Bit_score: 340
  • Evalue 5.70e-91
RNA polymerase sigma factor {ECO:0000313|EMBL:KJC49410.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 189.0
  • Bit_score: 342
  • Evalue 2.10e-91
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 189.0
  • Bit_score: 337
  • Evalue 1.40e-90

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
TTGAGTGCATCCCAGGCGGCCACCGATGAATCCCTGATCGCCCGCATTGCCCTAGGTGACCGCCTCGCGATGCAGGTTCTCTACGGCCGGCATCACGTACGGGTGTTTCGTTTCGCGTTGCGTCTGGTGCGCAATGAACAGGTCGCGGAGGATCTCATCAGCGAGGTGTTTCTCGATGTCTGGCGTCAGGCCGGCAAGTTCGAGGGCCGTTCCGCGGTTTCGACCTGGCTCCTGGCGATCACCCGGTTCAAGGCGTTGTCGGCGCTGCGCAAGCGCAAGGATGCCGAACTGGACGATGAGGCCGCGGCGGCGATCGAGGATACGTCCGACGATCCCGAAGTCGCGGTGACGAAGAAGGATACGGGTGAAGCGTTGCGAAATTGCCTGACCGCACTTTCGCCGGACCATCGGGAGATTATCGACCTCGTCTACTATCACGAGAAGTCGGTGGAGGAGGTCGCCGAGATCGTCGGCATCCCGGAGAACACGGTGAAGACGCGGCTGTTCTATGCGCGGAAGAAACTAGCCGAACTGCTGAAGGCAGCCGGCGTCGAGCGAGGTTGGCCATGA
PROTEIN sequence
Length: 190
LSASQAATDESLIARIALGDRLAMQVLYGRHHVRVFRFALRLVRNEQVAEDLISEVFLDVWRQAGKFEGRSAVSTWLLAITRFKALSALRKRKDAELDDEAAAAIEDTSDDPEVAVTKKDTGEALRNCLTALSPDHREIIDLVYYHEKSVEEVAEIVGIPENTVKTRLFYARKKLAELLKAAGVERGWP*