ggKbase home page

SCN18_30_10_14_R3_B_scaffold_950_19

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 17307..18233

Top 3 Functional Annotations

Value Algorithm Source
geranyltranstransferase (EC:2.5.1.10) similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 307.0
  • Bit_score: 526
  • Evalue 4.40e-147
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NWL5_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 308.0
  • Bit_score: 533
  • Evalue 1.30e-148
Farnesyl diphosphate synthase {ECO:0000313|EMBL:CEG10338.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 307.0
  • Bit_score: 536
  • Evalue 2.10e-149

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGACCGCCGTGACGACCACCGACGATTTCGCCACCCTGCTCGACACCACCGCCGCCGAGACCGAAGCCTTGCTCGGTACTTTGTTGTCGGATGCGCCGATGGCCGGCGAGATCGCCCGCCCGCGCCGGCTGATCGAGGCGATGCGGTATTCGAGCCTCAACGGCGGCAAGCGGCTGCGGCCGTTCCTCGCGGTGGCAAGCGCCGAGATGTTCGGCGTGCCGCGCGCCGGCGCGCTGATGGCGGGCGCCGCGCTGGAATGCATCCATTGCTATTCGCTGATCCATGACGATCTGCCCTCGATGGACAACAGCGACCTGCGGCGCGGTCGGCCGACCGCGCACAAGAAATACGACGACGCCACCGCGATCCTCGCCGGCGATGCGCTGCTCACCCTTGCGTTCGACATCATCACCCGCGACGAGGTGCACCGCGACGCCGGCGTGCGTCTCGCGCTGACGCGCGCGCTGGCGCGTGCCGCCGGCATCGGCGGCATGGCGGGCGGGCAGATGATGGACCTTGCCGGCGAAGGCCGCTTCGGCGACCGCGAGCCGCCGGACGTCGCAAAACTGCAGCAGATGAAAACCGGCGCGCTGCTCAAATATGGCTGCATCGCCGGCGCACTGCTCGGGCAGGCCTCGCAGGAGCAATACGCCGCGCTGGAAGCCTACGGCCATGCCTTCGGCGAGGCGTTCCAGATCGCCGACGATCTGCTCGATGTCGAAGGCGACGCGGCCGCGCTCGGCAAGCCGGCCGGACAGGACGCCGCGCTCGGCAAGACGACGTTCGTGACGCAGCTCGGCATCGACGGCGCGAAAGCGCGGCTGCGCGACCTGCTCAAGCAGGCCGACGCCGCGCTGGCGCCGTTCGGACCCAAGGGCGATGTGTTGCGCGCCGCCGCGCGTTTCGTTGCGGAGCGCCAGAACTAG
PROTEIN sequence
Length: 309
MTAVTTTDDFATLLDTTAAETEALLGTLLSDAPMAGEIARPRRLIEAMRYSSLNGGKRLRPFLAVASAEMFGVPRAGALMAGAALECIHCYSLIHDDLPSMDNSDLRRGRPTAHKKYDDATAILAGDALLTLAFDIITRDEVHRDAGVRLALTRALARAAGIGGMAGGQMMDLAGEGRFGDREPPDVAKLQQMKTGALLKYGCIAGALLGQASQEQYAALEAYGHAFGEAFQIADDLLDVEGDAAALGKPAGQDAALGKTTFVTQLGIDGAKARLRDLLKQADAALAPFGPKGDVLRAAARFVAERQN*