ggKbase home page

SCN18_30_10_14_R3_B_scaffold_1290_6

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 8300..8950

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NU94_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 208.0
  • Bit_score: 279
  • Evalue 2.30e-72
Transcriptional regulatory protein FixJ {ECO:0000313|EMBL:CEG09523.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 207.0
  • Bit_score: 279
  • Evalue 3.30e-72
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 208.0
  • Bit_score: 267
  • Evalue 2.60e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
TTGGGTCAAACACTTGCCTTCTCCCAGGATGCCCTGGTTTTCATCGTGGACGATGATCAGACGGTCCGCGAGACACTGGCCTTGCTGCTTCGGATCGAGGGATTTTCAACTCAAAGTTTCAGCGGCGACGGTGCTTTCCTGGCGGCGGTGCGGATTGCCAGCCCGGCTTGCGTGGTCATGGACCTGAATCCGCCCGGCCGTTCCGGGCTGGAGATATTGAAGGACTTGTCCAACCTGAAATGCGCCGCGCCAATCATCGTGATGTCGGGCAAATCGGATATCGCGACCGCGGTGGCGGCGATGAAGCATGGTGCGCTGGATTTTCTGGAAAAGCCGTTTGCCGCGTCCGCCATCCTGGAACGGGTGCGCGACGCGGTGGCGACCTATCGCAGGACCAGTGCGGCCAGCCTTTACGGTCTGTCCGACTTCCCCGGATGCCATCTTTTGACCAGCCGGGAGCGCGAAGTACTGGGGCAGGTGGCGGCCGGTGCGTCGAACAAGGAGGCTGGCCGGCGGCTCGGCATCAGCCCGCGCACCATCGAGGTGCACCGGGCGCGGATCATGGACAAGCTCGGCGCCAGGAATGCCGCGGACCTGATGCGTATCGTATTGTCGCAGAATGGGGCGCGGACGCACATGCGCGCGATCTAG
PROTEIN sequence
Length: 217
LGQTLAFSQDALVFIVDDDQTVRETLALLLRIEGFSTQSFSGDGAFLAAVRIASPACVVMDLNPPGRSGLEILKDLSNLKCAAPIIVMSGKSDIATAVAAMKHGALDFLEKPFAASAILERVRDAVATYRRTSAASLYGLSDFPGCHLLTSREREVLGQVAAGASNKEAGRRLGISPRTIEVHRARIMDKLGARNAADLMRIVLSQNGARTHMRAI*