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SCN18_30_10_14_R3_B_scaffold_1376_11

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(9710..11167)

Top 3 Functional Annotations

Value Algorithm Source
D-lactate dehydrogenase (EC:1.1.2.4) similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 456.0
  • Bit_score: 749
  • Evalue 5.10e-214
Glycolate oxidase, subunit GlcD n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2X8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 482.0
  • Bit_score: 781
  • Evalue 3.30e-223
Glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:EKS35801.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 482.0
  • Bit_score: 781
  • Evalue 4.60e-223

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
GTGACCTCCGATAATGAGCGAGCGGCCGTGGCTTTTTCCGATTCCTCTTCTCCGCAGATTTCGCAGGCGTCGTCCGGACGCGATGTCTCCAGCGCGATCGAGGCCCTGGCGGCGCGTTTCGGCAATCATCTGATCACCTCGCAGGCAGTGCGCGATCAGCACGCCCACACCACGTCATGGATCAAGCCGCAGCCGCCGGATGCGGTGGTGATGGCGCAATCGACTGTCGATATCCAGGATACGGTGCGAATCTGCGCCCGATATCGGGTGCCGGTGATCGCATTCGGGACCGGCACCTCCCTTGAGGGACAGGTCAACGCTCCCATGGGCGGCGTCTCGATCGATTTGCGCGAGATGAACCGCATTCTTGCGGTGAATGCTGAAGATCTCGATTGCGTGATCGAGCCCGGTGTGACGCGCAAGGCGCTGAACGAGCATCTGCGCGATCAGGGCCTGTTTTTCCCGATCGATCCGGGGGCCGACGCCTCGCTCGGCGGCATGGCGTCCACCCGCGCGTCGGGCACCAATGCGGTGCGTTACGGCACCATTCGCGACAACGTGCTGGCTCTGAAAGTCGTACGCGCCGATGGCGAGATCATCACCACGGGCACGCGCGCGCGTAAATCGTCCGCCGGCTACGACCTGACGCATCTGTTCATTGGTGCGGAGGGCACGCTCGGCATTATCTGCGAACTGACCATGCGCCTGCGCGGCATTCCGCAAAGCATCGCCGGTGGCTCGTGCTCGTTCGCAACCCTGCGCGGGGCCTGCGACGCCACCATCCTTGCGATCCAGACCGGCATTCCGCTGGCGCGGATCGAATTGTTGAACGTGGCGCAGGTCCGCGCCTGCAACATCTATTCGAAGCTGACGTTGCCGGAGACGCCGCTGCTGCTGCTCGAATTCCACGGCACCGAGGCGGACGTCGCCGAGCAGTCGCGGATGTTTGCGGACATCGCCAGGGAATGTGGCGGCGGCGACTTCGCCTGGGCCACGCGCCCGGAAGATCGGACCCGGCTGTGGCAGGCAAGGCACGACGCCTATTGGGCGGCGAGCGCGCTGCGTCCCGGCATCAAGGCGATGTCCACCGATGTGTGCGTGCCGATCTCGCGTCTCGCCGAGTGTCTGGTCGCGACCGAGGAGGATATCGCGCGCTCCGCTCTGCTGGCTCCGATCGTCGGGCATGTCGGCGACGGCAATTTTCACTGCCTCATGCTGTGCGACACCGACAACCCCGCGGAGGTGGAGCGGTCGGAGGACTTCCTGCACCGTCTGGTCGAGCGTGCGCATGCGATGGGCGGCACCTGCACCGGCGAGCACGGGATCGGGCAGGGCAAGCAGAAATATCTGACGCCCGAGCTTGGTCCCGAGGCGGTCGAGGCGATGCGGGCGCTGAAGACGGCGCTCGATCCCATGGGCATTTTCAATCCCGGCAAGATTGTTCCCGCATCGCTCTAG
PROTEIN sequence
Length: 486
VTSDNERAAVAFSDSSSPQISQASSGRDVSSAIEALAARFGNHLITSQAVRDQHAHTTSWIKPQPPDAVVMAQSTVDIQDTVRICARYRVPVIAFGTGTSLEGQVNAPMGGVSIDLREMNRILAVNAEDLDCVIEPGVTRKALNEHLRDQGLFFPIDPGADASLGGMASTRASGTNAVRYGTIRDNVLALKVVRADGEIITTGTRARKSSAGYDLTHLFIGAEGTLGIICELTMRLRGIPQSIAGGSCSFATLRGACDATILAIQTGIPLARIELLNVAQVRACNIYSKLTLPETPLLLLEFHGTEADVAEQSRMFADIARECGGGDFAWATRPEDRTRLWQARHDAYWAASALRPGIKAMSTDVCVPISRLAECLVATEEDIARSALLAPIVGHVGDGNFHCLMLCDTDNPAEVERSEDFLHRLVERAHAMGGTCTGEHGIGQGKQKYLTPELGPEAVEAMRALKTALDPMGIFNPGKIVPASL*