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SCN18_30_10_14_R3_B_scaffold_1377_3

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(1995..2714)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATP-binding protein, putative branched-chain amino acid transport n=2 Tax=Oligotropha carboxidovorans RepID=B6JE74_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 239.0
  • Bit_score: 442
  • Evalue 1.80e-121
Lipopolysaccharide export system ATP-binding protein LptB {ECO:0000313|EMBL:CEG07018.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 239.0
  • Bit_score: 446
  • Evalue 2.20e-122
branched-chain amino acid ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 239.0
  • Bit_score: 442
  • Evalue 5.00e-122

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCTCGGTCTTTCCAATGTGAAGGTCGATATTCAGGGGAGCTGCATTCTCAATGGCGTCACCCTGAATGTCGGTGCGGGCGAGTTGGTGTGTCTTGTTGGCCGCAACGGCGCCGGCAAGACCACCACGTTCCGCAGCATCATGGGCTATCGCCGCATTCGCTCCGGTGAGATCAATTTTGACAGCCTTGATCTGACCGCGATGCCGACCTGGAAGATTGCGCAAAGCGGGATTGGCTTCTCGCCGGAAGAATCGGAAGTCTACGCCGGCCTCACCGTGGCGGAGAATATCGAGTTGTCGACTTGGACACGGCCGACCGGGCGCGATTCCGGGATCCGTATCGAGGAAGCCTACAACGTGTTTCCGAAATTGCGGCAGTATCTCGCACGCGGCGGAGCGGAGCTGTCCGGCGGCGAGCGCAAGATGGTGTCGATTGCGCGTGCCCTGACGCTCGACCCAAAACTTCTGCTGCTCGACGAGCCGTTCGAGGGTTTGTCGCCTGCGATAATCCCGCTGATCGCCGAAGGCGTCGCCTCGATCCGCGCCATGGGCAAGGGCGTCCTGATGGCGGAATCCAACGTCCATCATATTCCAGACTATGTCGACCGGCTTTATGTGCTGGAGCGGGGGGAGTTGATGTTTACCGGTACCCTTGCGGACGCACATCGCGATCGGGACGTCATGCGAGTGATCGCTGGCGAAGTCGAGATGGCGTCGTAG
PROTEIN sequence
Length: 240
MLGLSNVKVDIQGSCILNGVTLNVGAGELVCLVGRNGAGKTTTFRSIMGYRRIRSGEINFDSLDLTAMPTWKIAQSGIGFSPEESEVYAGLTVAENIELSTWTRPTGRDSGIRIEEAYNVFPKLRQYLARGGAELSGGERKMVSIARALTLDPKLLLLDEPFEGLSPAIIPLIAEGVASIRAMGKGVLMAESNVHHIPDYVDRLYVLERGELMFTGTLADAHRDRDVMRVIAGEVEMAS*