ggKbase home page

SCN18_30_10_14_R3_B_scaffold_1052_2

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 250..741

Top 3 Functional Annotations

Value Algorithm Source
cytochrome C biogenesis protein CcmH n=1 Tax=Afipia birgiae RepID=UPI0002F5EF44 similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 166.0
  • Bit_score: 233
  • Evalue 1.50e-58
Uncharacterized protein {ECO:0000313|EMBL:EKS42044.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 159.0
  • Bit_score: 230
  • Evalue 1.00e-57
ccmH; cytochrome c-type biogenesis protein CcmH similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 156.0
  • Bit_score: 223
  • Evalue 2.50e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGAGACGCTTCCTCGCAATGCTGGCCCTTCTTCTGACGCTGGCGCCAACCTTGGCGCTCGCGGTGCAGCCGGACGAGATCATGGCCGATCCGGCGAAGGAAGCGCGGGCGCGGGCGCTGTCGCGCGAACTGCGCTGCATGGTGTGTCAGAACCAGTCGATCGATGATTCCGACGCGCCGCTGGCGCGCGATCTGCGCCTTCTGGTGCGCGAACGCATCGCCGCTGGCGCCACCGACCGGCAGGTGATCGACTATCTGGTGGCGCGCTATGGCGAGTTCGTGCTGCTCAAGCCGCGCCTTGAAGGGCAGACGCTGATCCTGTGGCTGCTGACGCCGCTGGTGCTGATCTGCGGCGGGTTCGGCCTGTGGTTTTACAACAGGCGCGCCCGCGCTGCCGCGCCGGAGAATGGGTCTCTCGCACTCACGCCCGAGGAAGAGGCGCGGCTGGAAAAGCTGATTGCGGATCAAGGCTCCCGGGAAAAGCCGGTCTGA
PROTEIN sequence
Length: 164
MRRFLAMLALLLTLAPTLALAVQPDEIMADPAKEARARALSRELRCMVCQNQSIDDSDAPLARDLRLLVRERIAAGATDRQVIDYLVARYGEFVLLKPRLEGQTLILWLLTPLVLICGGFGLWFYNRRARAAAPENGSLALTPEEEARLEKLIADQGSREKPV*