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SCN18_30_10_14_R3_B_scaffold_1052_8

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(8391..10823)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 819.0
  • Bit_score: 1169
  • Evalue 0.0
PAS sensor protein n=1 Tax=Afipia birgiae RepID=UPI00035D11F6 similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 818.0
  • Bit_score: 1177
  • Evalue 0.0
multi-sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 775.0
  • Bit_score: 1115
  • Evalue 0.0

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2433
ATGGCGCGTGCGCATGTTGCGAGCACGTGTGTCCAATCCGATTCGATCAAGGGATTGGCACAGTCGATCGCGAAGCCTGCTTATCAACGCTTGCTGATTGCAGAGCCTGTGCTGCGCCGGGCGGTCCCCACCCTCGTCATCGCTTTCCTTGCCACCATCTGCGTCGGCGCATTCGTTCAGGTCACGGATCAGACCCGGCAAAAGCAGGCCGCGATGAAGCGCGAGATCGCCGCGCTGGCGGATGTGCTGGCCGAGCGGATCGAACGTCTCGGGCCGGTGCATCAGGACCGCGACGCGGTCGCCGGCAAGCTGCAACTGCTGCTGCCCTCGCTGATGCCGTCATGGGGAATCGCATCGGGCCGCCAGATCGTCATCAGCGGCGCCGGGCAACGCACTCTCGCGGAATTCTCCGGCGAAAATCCGGTGATGGCGCCCGACATCTTGCTCGATACAGTGGAAGCGGCGCAGCCGGCGCAGAACGCCATCGCGGAATTGAAGCTGCCGAACGGGCACGGGGCGACGGCGATCCAGCGCGCCATTCCCTCGCTGCCGGGCCGCGTGGTGATCATGCAGCAGAGCGTCGAGGCGCTATGGCGTTCCGACACCGCGTTGCAGGTCACGCTGTCGGCGACCACCGGCTTTGTCGTGCTGATTCTCGGCTTCGCCTTTCACTGGCAGTCCAGCCGTGCGCGAGAGAGCGACCTGATCAACGACGCCGTGCGCGGGCGCATCGACACCGCGCTCAACAGCGGCCGCTGCGGATTGTGGGACTGGGATTTGTCGCGCGGCCGGATTTTCTGGTCGCAATCGATGTTCACCATGTTGGGGCTGGAGAGCCGCAGCGACCTGCTCGCTTTCGGCGAGGTCAACGCTTTGGTGCAGTCCGAAGACGTCGATCTGTTGCAACTGGCCGATCAGCTGGTGAGCGGCAAGATCGATCAGGTCGATTGCTCGTTCCGCATGAAGCATGCCGCCGGGCACTGGATCTGGCTGCGGGTACGTTGCGAACTGATCACCGCCCATGGCGACGGCTGCCATCATCTGATCGGCATCGTGGTCGACATCACCGAGCAGCGCAGCCTCGCCGAACGCAGCATCGAGGCGGACCTGCGGCTGCGCGACGCGATCGAGACCATTCCCGAGGCCTTCGTGCTGTGGGACGCCGAAGACCGCCTGGTGCTGTGCAACTCGCATTTCCAGCGCCTGCACAAGCTGCCGGATACGGCCGTGGTGCCGGGCACATCCTACGAGACGCTCGCCGAAGTCGGCCGCATGCCCGAACTGCGCGGCCGCATCATCGACAACGCGGCAGTGCCGGGCGCGCGCACTTTCGAGGTGCAACTCGAGAACGGCTCATGGCTCTATGTCAGCGAGCGGCGCACCAAGGACGGCGGCTATGTCTCCGTCGGCACCGACATCACCAAGATCAAGCAGCATGAGCAGCGCCTGATCGACAATGACATGCGGCTCACCGCCAACGTGATCGACCTGAAACGCTCGCAGGCCGAACTGGAGCGGCAGGCCCGCGAGCTGGCCGAGCTTGCGCAGAAATACGCCGAGGAAAAACAGCGCGCCGAGGACGCCAATCAGACCAAGTCGAAATTCCTCGCCAATATGAGCCACGAGCTGCGCACGCCGCTCAACGCCATCATCGGCTTCTCCGAGGTGATGGGGTCGGGCATGTTCGGCGAGCTTGGCTCGGAAAAATATCAGGAGTACTGCCACGACATCCTGACGAGCGGAAACTACCTGCTGGACGTGATCAACGACATTCTCGACATGTCGAAGATCGAGGCCGGACGGATGAAGCTCGATCCGGAGCCGCTCGATCTCGCCGACACGCTCACGGAGTCGCTGCGCGTCGTTTCCGGCCGCGCCGAGGACAAGAACCTGATACTCGACGCCGATATCGACGGGCTCATTCCAGTGGTCGCCGATCGGCGGGCGATGAAGCAGATCGCGGTCAACCTGCTCTCCAACGCGGTGAAGTTCACACCGGATGGCGGGCGCGTGCTGGTGCGCAGCCGTGTGCTGGAAAATTCGGTGATGCTGATCTTCGCCGACACCGGCATCGGTATCGCCCCGCATTCGCTGGAGAAGCTGGGGCGGCCGTTCGAGCAGGTCGAAAGCCAGCTCACCAAGACCTATCACGGATCGGGGCTGGGTCTGGCCATCGCCAAGTCGCTGGCGGGCCTGCACGGCGGCTCGATCCGGCTGCGCTCCAAGCTCGACGTCGGCACCGTGGTATGTGTGACGCTGCCGCGCGGCTCGGATAGCGCGAGTGCTACGCTCGCGCCTCGAGCAGGCGCAGGAAAATCGCGCGAACGTCGCTTTGTATCTCTCGAACGCGCGCCTCAAGCGCAGAAAAATCGGGCGCGTCTCCGGCTCGCGTCATCACGCGCAGCAGATCTTCCCCCGCAGTTTCTGGCTTGA
PROTEIN sequence
Length: 811
MARAHVASTCVQSDSIKGLAQSIAKPAYQRLLIAEPVLRRAVPTLVIAFLATICVGAFVQVTDQTRQKQAAMKREIAALADVLAERIERLGPVHQDRDAVAGKLQLLLPSLMPSWGIASGRQIVISGAGQRTLAEFSGENPVMAPDILLDTVEAAQPAQNAIAELKLPNGHGATAIQRAIPSLPGRVVIMQQSVEALWRSDTALQVTLSATTGFVVLILGFAFHWQSSRARESDLINDAVRGRIDTALNSGRCGLWDWDLSRGRIFWSQSMFTMLGLESRSDLLAFGEVNALVQSEDVDLLQLADQLVSGKIDQVDCSFRMKHAAGHWIWLRVRCELITAHGDGCHHLIGIVVDITEQRSLAERSIEADLRLRDAIETIPEAFVLWDAEDRLVLCNSHFQRLHKLPDTAVVPGTSYETLAEVGRMPELRGRIIDNAAVPGARTFEVQLENGSWLYVSERRTKDGGYVSVGTDITKIKQHEQRLIDNDMRLTANVIDLKRSQAELERQARELAELAQKYAEEKQRAEDANQTKSKFLANMSHELRTPLNAIIGFSEVMGSGMFGELGSEKYQEYCHDILTSGNYLLDVINDILDMSKIEAGRMKLDPEPLDLADTLTESLRVVSGRAEDKNLILDADIDGLIPVVADRRAMKQIAVNLLSNAVKFTPDGGRVLVRSRVLENSVMLIFADTGIGIAPHSLEKLGRPFEQVESQLTKTYHGSGLGLAIAKSLAGLHGGSIRLRSKLDVGTVVCVTLPRGSDSASATLAPRAGAGKSRERRFVSLERAPQAQKNRARLRLASSRAADLPPQFLA*