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SCN18_30_10_14_R3_B_scaffold_1052_19

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(22745..23503)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JE35_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 252.0
  • Bit_score: 396
  • Evalue 1.20e-107
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 252.0
  • Bit_score: 396
  • Evalue 3.30e-108
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFI51605.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 241.0
  • Bit_score: 393
  • Evalue 1.80e-106

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGCCCAATCAGCCCCGACAGATCGATCTCGAAAAACAAGCCGGTCAGCGGGGGAGCCGGGCCAAGGCACCGCCCGAACTCGTGGTGGGCCGTTTCGCGCCCGAACAGACCTTCAAGACGAGGGCCTACGAGGCGCTCAAGAGCGCCATCCTCGAAATGGACATCTATTCCTCGTCGGAGCCGACCTGGATCGACGAACGGCAGCTTTCCGAGCAGCTCGGCGTCAGCCGCACCCCGGTGCGCGAGGCCATCGTCATGCTCGAGCACGAAGGCCTGGTGAAGTCCGTCGCGCGCAAGGGCGTGATGGTGCTGAAGAAGACCCGGCGCGAGGTCATCGACATGATCCATGCCTGGGCGGCGCTGGAGAGCATGGCGGCGCGGCTTGCCACGCTGCATGCCAGCGACGAAGAGATCGCCAACCTGCGCAAACTGTTCCAGAGCTTCAACGAGGGCCACAAGCCCTCCGACCATCTCAGCGAATACTCCACGGCAAACATCCAGTTTCATCAGAGCATCGTGAAGCTCTCCGGCTCGCAGGTGCTGATCGACATGACCGATCAGGTGCTGCTGCATGTGCGTGGCATCCGCCGCATCACGATCGGCCGCGACGACCGCGCCTCACGCTCGATCATCGATCATCTGGCCATCATCGATGCGATCGAGCAGCGCGACACCGAGCTCGCGGTGAAACTCTCGCGCGACCACACGCTCAACCTCGCCGAATATGTCGAGGCCAACAGCCAGGGCATCTTCGAGTAA
PROTEIN sequence
Length: 253
MPNQPRQIDLEKQAGQRGSRAKAPPELVVGRFAPEQTFKTRAYEALKSAILEMDIYSSSEPTWIDERQLSEQLGVSRTPVREAIVMLEHEGLVKSVARKGVMVLKKTRREVIDMIHAWAALESMAARLATLHASDEEIANLRKLFQSFNEGHKPSDHLSEYSTANIQFHQSIVKLSGSQVLIDMTDQVLLHVRGIRRITIGRDDRASRSIIDHLAIIDAIEQRDTELAVKLSRDHTLNLAEYVEANSQGIFE*