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SCN18_30_10_14_R3_B_scaffold_1055_23

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(22890..24383)

Top 3 Functional Annotations

Value Algorithm Source
Glycolate oxidase, subunit GlcD n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6J6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 497.0
  • Bit_score: 887
  • Evalue 4.30e-255
Glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:EKS37121.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 497.0
  • Bit_score: 887
  • Evalue 6.10e-255
glcD; glycolate oxidase subunit GlcD similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 497.0
  • Bit_score: 873
  • Evalue 1.80e-251

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGTCGATTATGATGCCCGCGGCCGACGATGCCATTCTGGCGCGGCGTGACGAGATCATTGCCGCGCTGCAGAAGATCGTGCCGGGCGAAGGCGTGATCTTCAAGGAAGCGGAGCTGCGCCCCTATGAATCCGACGGTGTGACGGCCTATCGGCAATTGCCGATGGTGGCGGTGCTGCCGGACAATACCGAGCAGGTCTCGCAGATTCTGAAATATTGCTACGACAACGGCATCAAGGTGGTGCCGCGCGGCTCCGGCACCTCGCTGTCGGGCGGCGCGCTGCCGCTGAAGGACGCGGTGCTGCTGGGGCTGGGCAAATTCAAGCGGGTGCGCGAGATCGATTTCGAGAACCGCGTCGCGGTGGTCGAGCCGGGCGTCACCAATCTCGCGGTCAGCCAGGCGGTGGCGCATGAGGGGTTCTATTACGCGCCGGATCCGTCCTCGCAGATCGCCTGCTCGATCGGCGGCAACATTGCCGAGAATTCCGGCGGCGTGCACAGTCTGAAATACGGCCTCACCACCAATAACGTGCTCGGCTGCGAATTCGTGCTGATCACCGGCGAGGTGCTGCGGATCGGCGGCAAGGCGCCGGAGAATGACGGCTACGATCTGATGGGCGTCATCACCGGCTCCGAGGGCCTGCTCGGCGTCGTCACCGAAGTCACGGTGCGTATCCTCAAGAAGCCGGAAACCGCGCGCGCTTTGATGGTCGGCTTCGCCTCGGTGGAGGCGGCCGGCCAGTGCGTGGCCGACATCATCGGCGCGGGCATCATTCCCGGCGGCATGGAGATGATGGATCGCGACGCCATCGCCGCGGCCGAGGCGTTCGTGCATGCCGGCTATCCGCTCGATGTCGAGGCGCTGCTGATCATCGAACTCGACGGGCCGACCATCGAGGTCGACGAACTGATCCGCCGCGTCGAGGCGATTGCGCGCGGCTGCGGGCAGACCACGCTGCAGATTTCCAACTCCGAGCAGGAGCGGCTGTTGTTCTGGGCCGGCCGCAAGGCGGCGTTTCCGGCGGTCGGCCGTCTTTCGCCGGACTATCTGTGCATGGACGGCACCATTCCGCGCGGCCAGTTGCCGGCGGCGCTCGCCGGCATTCGCGAACTGTCGCAGAAATACGGACTGCGCTGCGCCAACGTGTTCCACGCCGGCGACGGCAATCTGCATCCGCTCATTCTCTACGACGCCAACATGCCGGGCGAGATGGACAAGGCGGAGGCTTTCGGCGCCGACATCCTGCGGCTTTGCGTCAGGCTCGGCGGCGTGCTCACCGGCGAGCACGGCGTCGGCGTCGAGAAGCGCGACCTGATGCCGGAGATGTTCAGCGAGATCGACCTCGCGCATCAGCAGCGCGTCAAATGCGCATTCGATCACAAGGGCCTGCTCAATCCCGGCAAGATGTTCCCCGTGCTGCATCGCTGCGCCGAACTCGGCCGCATGCATGTGCGCGGCGGCAAGCTGCCGTTCGCCGACATTCCGAGATTCTGA
PROTEIN sequence
Length: 498
MSIMMPAADDAILARRDEIIAALQKIVPGEGVIFKEAELRPYESDGVTAYRQLPMVAVLPDNTEQVSQILKYCYDNGIKVVPRGSGTSLSGGALPLKDAVLLGLGKFKRVREIDFENRVAVVEPGVTNLAVSQAVAHEGFYYAPDPSSQIACSIGGNIAENSGGVHSLKYGLTTNNVLGCEFVLITGEVLRIGGKAPENDGYDLMGVITGSEGLLGVVTEVTVRILKKPETARALMVGFASVEAAGQCVADIIGAGIIPGGMEMMDRDAIAAAEAFVHAGYPLDVEALLIIELDGPTIEVDELIRRVEAIARGCGQTTLQISNSEQERLLFWAGRKAAFPAVGRLSPDYLCMDGTIPRGQLPAALAGIRELSQKYGLRCANVFHAGDGNLHPLILYDANMPGEMDKAEAFGADILRLCVRLGGVLTGEHGVGVEKRDLMPEMFSEIDLAHQQRVKCAFDHKGLLNPGKMFPVLHRCAELGRMHVRGGKLPFADIPRF*