ggKbase home page

SCN18_30_10_14_R3_B_scaffold_2021_22

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(22340..23152)

Top 3 Functional Annotations

Value Algorithm Source
Uracil-DNA glycosylase, family 4 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRZ7_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 272.0
  • Bit_score: 419
  • Evalue 1.80e-114
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EKS28998.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 272.0
  • Bit_score: 419
  • Evalue 2.50e-114
uracil-DNA glycosylase, family 4 similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 270.0
  • Bit_score: 411
  • Evalue 1.10e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGACACCCGAGCCGACCCCCTCCGCGCATGATCTGCTGGCCTTCTATCTGGAGGCCGGCGTCGATTGCGCGCTGTCGGAAGAGCCCGCCAACCGGCTCGCGGAACCGGCCGAGGAACTGCCCGCGCCCCGCGCCGCCGCACCGCGCGCCTTGCCCCCGCAAACGAGCATCCCCGCGCCCGCCATCATGCGCGGCGAGACCGCCCCGGCACCGGATGCGGCGATCGAATCGGCACGCGCGCTGGCACCCAAAGCACAGACGCTGGAAGACCTGCGTACGCTGCTGCAAAGCTTCGATGGCTGCGCGCTGAAGACCACCGCAACACGCATGGTGTTCGCCGACGGCAACCCGCAGGCCAAGATCATGTTCGTCGGCGAAGCGCCCGGCCGTGACGAGGATCTCGAAGGACTGCCCTTCGTCGGCCGCTCCGGCAAGCTGCTCGACCGCATGCTGGCGGCGATCGGGCTCGACCGCAGCAGCGCCTATATCGCCAACATCATTCCCTGGCGTCCGCCGGGCAATCGCGATCCCTCCCCGCACGAGACCCAGATGTGCCTGCCGTTCATCCGGCGGCAGATCGAACTGGTCGATCCCGACGTGCTGATCTGTCTCGGCAAGCCGTCGTCGCAAGCGGTGCTCGACCTCAAGGACGGCATCATGAAAACGCGCGGACGCTGGGTCGATTATCACACCGGCACGCGCAGCATCCGCGCGATGCCGACATTCCACCCCGCTTATCTGCTGCGTCAGCCGATCTACAAACGCCTGACCTGGCAGGACCTGCGCGCGATCAAAAAGACGCTGGTCTCCTGA
PROTEIN sequence
Length: 271
MTPEPTPSAHDLLAFYLEAGVDCALSEEPANRLAEPAEELPAPRAAAPRALPPQTSIPAPAIMRGETAPAPDAAIESARALAPKAQTLEDLRTLLQSFDGCALKTTATRMVFADGNPQAKIMFVGEAPGRDEDLEGLPFVGRSGKLLDRMLAAIGLDRSSAYIANIIPWRPPGNRDPSPHETQMCLPFIRRQIELVDPDVLICLGKPSSQAVLDLKDGIMKTRGRWVDYHTGTRSIRAMPTFHPAYLLRQPIYKRLTWQDLRAIKKTLVS*