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SCN18_30_10_14_R3_B_scaffold_2024_6

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(7132..8805)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RecN n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZS3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 557.0
  • Bit_score: 926
  • Evalue 9.40e-267
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 557.0
  • Bit_score: 926
  • Evalue 1.30e-266
recN; DNA repair protein similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 557.0
  • Bit_score: 889
  • Evalue 2.80e-256

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1674
ATGCTGGCCCGTCTTTCGATCCGTGACATCGTCCTGATCGAACGGCTCGACATCGATTTCTTAAAAGGCCTCGCGGTGCTCACCGGTGAAACCGGTGCGGGCAAATCCATCCTTTTAGATGCTTTCGCACTCGCGCTGGGCGGGCGGGGCGATGCCGGTTTGGTGCGCCATGGCGCCGAGCAGGGTCAGGTCACCGCGGTCTTTGATGTCCCTAAGAAGCACCCTGCCGCAGCGATCCTGCGCGAGAACGGTCTCGAAGACACCGGAGAGATGATTCTGCGCCGGGTGCAGTTCGCCGATGGCCGCACTCGCGCTTTCCTCAACGACCAGACCATCAGCGTGCAGACCCTGAAGGCGATCGGCGCATCGTTGGTCGAAATCCATGGCCAGCATGACGAGCGGGCGCTGGTCGATACCGCGACGCATCGGCGGCTGCTCGACGCCTTTGCCGGCCTTGAGAAGAACGTTGCGGCCATCGAGGACTTATGGGAGACGCGCCGCGCTGCGCGGCAGGCGCTGGAAGCTCATCGCGAGGGCATGGCGCGGGCGGCGCGCGATGCCGATTATCTGCGTCATGCTTCCGACGAACTGATCGCGCTGGCGCCGCATGACGGCGAAGAGACCCGGCTTGCCGAGCGCCGCACCGCGATGATGCAGGGCGAGAAAATCTCCGAGGATCTGCGCGAGGCGCTGGCCGCGGTCGGCGGCCCGCAATCGCCGGTCGCGGCGCTGGCCGCTGCCGTGCGCCGGCTGGAGCGCCGCACCGTGCAAGCGCCGAAGCTGGTCGAGGAGGCGGTGAAGGCGATGGACGATGCGCTCAACTCGCTGGCCGAGGCCGAGCAGCATCTGGGCGCTGCGATTGCCGCGGCGGATTTCGATCCGCTGGAACTGGAGCGGATCGAGGAGCGCCTGTTCGCGTTGCGCGGCGCGGCGCGGAAATACAACACGCCGGTCGATGCGCTGGCGGCGCTGGCGGAAAAATTCAAGGCCGATGTCGCTTTGATCGATGCAGGCGCCGACCGGCTCAAGGAACTGGAGAAGGCGGTGCGCGCCGCCGACAAGGCCTATGATGAGGCGGCGCAGAAACTGTCCGCCGCGCGCCTGAAATCCGCCGACAAGCTCAACAAGGCGGTTAACGCCGAACTTGGCCCGCTGAAACTCGACCGCGCCAAATTCATTACCCAGATCGAGAGCGATATCGCTTCTCCGGGGCCGCAGGGTTTCGACCGTGTCGAGTTTTGGGTGCAGACCAATCCCGGCACCAGGCCGGGGCCGTTGATGAAGGTGGCCTCGGGTGGCGAGCTGTCGCGTTTCCTGCTGGCGCTGAAGGTCGTGCTGTCGGATCGCGGCTCGGCACCGACTTTGGTGTTCGATGAGATCGACACCGGCGTCGGCGGTGCGGTGGCGGACGCCATCGGCGCGCGGCTGGCGCGCCTTGCGGACAAGGTGCAGGTGATGGCGGTGACGCATGCGCCGCAGGTTGCCGCGCGCGCCGACCAGCATCTCTTGATCTCCAAGGACGCGCTCGACAAGGGCAGGCGCGTCGCCACCCGCGTCGATGCGCTGGCCGCCGATCATCGCCGCGAGGAGATCGCGCGCATGCTCGCCGGTGCGGAGATCACCGCCGAGGCACGCGCTGCGGCGGAGCGGCTGCTGCGCGCCGCGACGGCCTGA
PROTEIN sequence
Length: 558
MLARLSIRDIVLIERLDIDFLKGLAVLTGETGAGKSILLDAFALALGGRGDAGLVRHGAEQGQVTAVFDVPKKHPAAAILRENGLEDTGEMILRRVQFADGRTRAFLNDQTISVQTLKAIGASLVEIHGQHDERALVDTATHRRLLDAFAGLEKNVAAIEDLWETRRAARQALEAHREGMARAARDADYLRHASDELIALAPHDGEETRLAERRTAMMQGEKISEDLREALAAVGGPQSPVAALAAAVRRLERRTVQAPKLVEEAVKAMDDALNSLAEAEQHLGAAIAAADFDPLELERIEERLFALRGAARKYNTPVDALAALAEKFKADVALIDAGADRLKELEKAVRAADKAYDEAAQKLSAARLKSADKLNKAVNAELGPLKLDRAKFITQIESDIASPGPQGFDRVEFWVQTNPGTRPGPLMKVASGGELSRFLLALKVVLSDRGSAPTLVFDEIDTGVGGAVADAIGARLARLADKVQVMAVTHAPQVAARADQHLLISKDALDKGRRVATRVDALAADHRREEIARMLAGAEITAEARAAAERLLRAATA*