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SCN18_30_10_14_R3_B_scaffold_2024_7

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(8817..9725)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamD n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2S3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 287.0
  • Bit_score: 501
  • Evalue 4.10e-139
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 287.0
  • Bit_score: 501
  • Evalue 5.70e-139
coml, competence lipoprotein similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 281.0
  • Bit_score: 500
  • Evalue 3.30e-139

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGACGGTTGAAACGTGTAATCTTTCCGGACCGGAGACTCGGCAAGACAGGGCTGGGCATGGCGTTGCCAAGCGCTTGCTGCTGGCCGTGAGCCTGATGGCGTTTGCCGCGCCGCTGGGCGGCTGCGGCACGGGCAGCCTCTACGACAAGTTCTTCACCAAGGACGAGACGTTCGTCGATCAGCCGGCCGACAAGCTCTACAATGAGGGCTTGTACCTCATGAACGAGAAGCACGACCGCAAGGCGGCGATGAAGAAGTTCGAGGAGGTCGACCGCCAGCATCCGTATTCGGACTGGGCCCGCAAATCGCTGCTGATGTCGGCCTATGCCTCCTATGAGGCCGGCGCCTATGATGAGTGCATCTCCTCCGCCAACCGCTATATCAGCCTGCATCCGGGCAGCCCCGATGCAGCCTACGCGCAATATCTGATCGCGGCGGCGAATTACGATCAGATTCCCGACGTGACCCGCGATCAGGGGCGCACCGAGAGGGCGATCGCCGCGCTGGAAGAAGTGGTGCGCAAGTATCCGACTTCGGAATACGCCACCCAGGCCAAGAAGAAGCTCGAAGGCGCCCGCGACCAGCTCGCCGGCCGCGAGATGAATGTTGGCCGCTACTACATGGAAAAGCGCGACTACACGGCGGCCATCAACCGCTTCAAGGTGGTGGTCACGCAGTATCAGACCACACGTCATGTCGAGGAGGCGCTGGCGCGCCTGACCGAGGCCTATATGGCGATCGGCATCGTCGGTGAGGCCCAGACGGCGGCGGCCGTGCTTGGCCACAACTTTCCTGACAGCCGCTGGTACAAAGACGCCTACAATCTTGTAAAGTCGGGCGGTATGGAGCCTCAGGAGAATCGGGGTTCCTACATCAGCAAGGCATTCAGGAAGCTCGGCCTCGGTTAG
PROTEIN sequence
Length: 303
MTVETCNLSGPETRQDRAGHGVAKRLLLAVSLMAFAAPLGGCGTGSLYDKFFTKDETFVDQPADKLYNEGLYLMNEKHDRKAAMKKFEEVDRQHPYSDWARKSLLMSAYASYEAGAYDECISSANRYISLHPGSPDAAYAQYLIAAANYDQIPDVTRDQGRTERAIAALEEVVRKYPTSEYATQAKKKLEGARDQLAGREMNVGRYYMEKRDYTAAINRFKVVVTQYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSRWYKDAYNLVKSGGMEPQENRGSYISKAFRKLGLG*