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SCN18_30_10_14_R3_B_scaffold_1806_2

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(286..888)

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma(54) modulation protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JCM6_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 200.0
  • Bit_score: 327
  • Evalue 9.10e-87
sigma 54 modulation protein/ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 200.0
  • Bit_score: 327
  • Evalue 2.60e-87
Putative sigma(54) modulation protein {ECO:0000313|EMBL:AEI04806.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 200.0
  • Bit_score: 327
  • Evalue 1.30e-86

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGACCCTCCGAGTTTCTGGAAAAAGCATCAGTGTCGGCGAAGCTCTGCGCGAACGCATCATCGCCCGCACCGAGGAAGTTCTCAGAAAATATTTTGACGGGAATTATTCGGGCCACATCACACTCAGCAAAGATGGTTTTGGATTCCGCACCGATTGCGCGCTTCATCTCGATTCGGGAATCACGCTGGAAGCCGATGCGATGGCGGCGGATGCCTATGCCAGCGCCGATCAGGCGCTGATCCAGATCGAGAAACGGCTGCGCCGCTACAAGAGCCGTCTGAAGGATCGTTCGGCGCGCAAGGCCCATGCGGCGTCCGCCGCGCTTGCCGCGCTCGACGGCGCGGCGATCTCGGCCTCGAGCTATGTCATCGAAGGCGTGGACAACGACGCGGAGGGCGAAGTCACCGCGTTCAATCCGGTGATCATCGCTGAATCGACCGAATCGCTGCGGCGGTTTTCGGTCAGCGAGGCGGTGATGGAACTCGATCTCACCGGCGCTCCCGCCATGGTGTTCCAGCATGGCAGCAGCGGCCGCGTTAACGTGATTTACCGCCGTTCGGACGGTAATCTTGGCTGGGTTGATCCACCGGCAGGCAGTTAA
PROTEIN sequence
Length: 201
MTLRVSGKSISVGEALRERIIARTEEVLRKYFDGNYSGHITLSKDGFGFRTDCALHLDSGITLEADAMAADAYASADQALIQIEKRLRRYKSRLKDRSARKAHAASAALAALDGAAISASSYVIEGVDNDAEGEVTAFNPVIIAESTESLRRFSVSEAVMELDLTGAPAMVFQHGSSGRVNVIYRRSDGNLGWVDPPAGS*