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SCN18_30_10_14_R3_B_scaffold_1806_17

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 13496..13855

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1P5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 119.0
  • Bit_score: 223
  • Evalue 1.10e-55
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 119.0
  • Bit_score: 223
  • Evalue 1.50e-55
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 119.0
  • Bit_score: 221
  • Evalue 1.20e-55

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCTCGCGTCAAACGCGGTGTGACGGCTCATGCCAAGCACAAGAAAGTCTACAAGGCCGCCAAGGGTTTTCGGGGCCGCCGCAAGAACACCATCCGCGCCGCCAAGGCGGCCGTGGACAAGGCCGCGCAGTATGCCTTCGTCGGCCGCAAGCTGAAGAAGCGCACCTTCCGCGCATTGTGGATCCAGCGCCTCAACGCCGCCGTGCGTCCGTTCGGCCTGACCTACAGCCGATTTATCGACGGCCTCGCCAAGTCGGGCGTGGTGGTCGACCGCAAGGTGCTGTCCGATCTCGCGATCCACGAGCCGGCGGCTTTCCAGGCGATCGCTGAAAAGGCCAAGGCCGCGCTCGCGGCTTAA
PROTEIN sequence
Length: 120
MARVKRGVTAHAKHKKVYKAAKGFRGRRKNTIRAAKAAVDKAAQYAFVGRKLKKRTFRALWIQRLNAAVRPFGLTYSRFIDGLAKSGVVVDRKVLSDLAIHEPAAFQAIAEKAKAALAA*