ggKbase home page

SCN18_30_10_14_R3_B_scaffold_1678_25

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(25032..25691)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V784_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 218.0
  • Bit_score: 339
  • Evalue 1.50e-90
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KJC39352.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 219.0
  • Bit_score: 340
  • Evalue 1.20e-90
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 220.0
  • Bit_score: 332
  • Evalue 8.70e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
CTCGATCCGGGCTGGAAGACCTATTGGCGCACGCCGGGAGATTCCGGCGTGCCGCCGCGTTTTGATTTTTCCAAATCCGACAATGTCGAGGCGGTGAACGTGTTGTGGCCCGCGCCGAAGAAATTTCCCGACGGCTCCGGCGGTTTCTCGCTCGGTTATCATGAGCAGGTGGTGGTGCCGCTGCGCATCGTGGTGAAGAATCCCGACAAGCCGATGACGCTGCGCGCCCATGTCAGCTACGCGATCTGCGAGAAGCTCTGCGTGCCAATGGAAGCCGATCTCGAACTGCCGTTCGTCAGCGTCGCCAGCACCGAGGACAGCGCGCTCGCGGCCGCGCTCGACACCGTGCCCAAGCCGGCCAATATCGGCGATCCCACGCCGCTCACCATCCGCGACGTCAAGCGCAGCGGCGCCAAGACCGTGCATGTCGACGTCGCCGCGCCGGATGCCAAGGAGGTTGGCCTGTTCGTCGAAGGTCCGACGCCGGACTGGGCGCTTCCCGTGCCCAAACTGCTCAAGCACGAACCGCATAACGTGCAGCGCTTTGCCTTCGATCTCGACGGTGTGCCGTCAGGTGCCGATCCGGCCGGAGCGGCGCTGAAATTCACGCTGGTGGGCGGCAACGGCCGCGCCTATGAATTCAACGTCAATCTGAATTGA
PROTEIN sequence
Length: 220
LDPGWKTYWRTPGDSGVPPRFDFSKSDNVEAVNVLWPAPKKFPDGSGGFSLGYHEQVVVPLRIVVKNPDKPMTLRAHVSYAICEKLCVPMEADLELPFVSVASTEDSALAAALDTVPKPANIGDPTPLTIRDVKRSGAKTVHVDVAAPDAKEVGLFVEGPTPDWALPVPKLLKHEPHNVQRFAFDLDGVPSGADPAGAALKFTLVGGNGRAYEFNVNLN*