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SCN18_30_10_14_R3_B_scaffold_1330_3

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 2276..2587

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0D0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 97.0
  • Bit_score: 191
  • Evalue 2.30e-46
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 97.0
  • Bit_score: 191
  • Evalue 3.30e-46
ihfB; integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 102.0
  • Bit_score: 189
  • Evalue 3.30e-46

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGATCAAATCCGAGCTGGTTCAGCGCATCGCCGAACACAATCCCCACCTCTATCAGAGAGACGTGGAGAACATTGTGAACGCCATTCTCGATGAAATCGTCGCCGCGCTTGCGCGAGGCGATCGGGTCGAGTTGCGTGGTTTTGGCGCGTTTTCAGTCAAGCACCGTCCGGCACGCGCCGGACGCAATCCGCGGACCGGCGCGCATGTTCCGGTCGAGCAGAAAAGCGTGCCGTTCTTCAAGACCGGCAAGGAAATGCGCGAACGGCTCAACCGCGACAACAACGGCCAGGGCGATCTCGGCGCGAATTGA
PROTEIN sequence
Length: 104
MIKSELVQRIAEHNPHLYQRDVENIVNAILDEIVAALARGDRVELRGFGAFSVKHRPARAGRNPRTGAHVPVEQKSVPFFKTGKEMRERLNRDNNGQGDLGAN*