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SCN18_30_10_14_R3_B_scaffold_2082_3

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 1541..2695

Top 3 Functional Annotations

Value Algorithm Source
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:EFI50169.1}; EC=2.4.1.182 {ECO:0000313|EMBL:EFI50169.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 383.0
  • Bit_score: 573
  • Evalue 1.10e-160
lpxB; lipid-A-disaccharide synthase LpxB (EC:2.4.1.182) similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 383.0
  • Bit_score: 553
  • Evalue 4.20e-155
Lipid-A-disaccharide synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9M5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 383.0
  • Bit_score: 573
  • Evalue 8.20e-161

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
GTGAGCGCGCCGCGCAAGGTGTTCCTGATTGCGACCGAAGCCTCGGGCGATCATCTCGGCGGAGCTTTGATGCGCGAATTGCACGCGCGGCTCGGCGCGGGCGTGGGGTTCGAAGGCATCGGTGGCCGCGACATGACGGCGGCGGGTCTTGTCTCGCAATTTCCGATCGACGATCTCGCCATCGTCGGCTTCGCCGGCGTGGCGAAGCAATTGCCGATGCTGCTGCGGCGGATCCGCGAGGCAACGCGGGCAGTGCTCGCGGCAAGGCCGGACGTGCTGGTGATCATCGACAGTCCGGATTTTACCCATCGCGTCGCGCGCCGTGTGCGCGCCGCCGACCCGACCATTCCGATCGTCAATTATGTCTCGCCCACGGTGTGGGCATGGCGGCCCGGTCGCGCCCGCGCGATGGCGCGCTATGTCGATCACGTTCTGGCGCTGCTGCCGTTCGAGCCGCAGGAACATCTTGCGCTGGGCGGGCCGCCTTGCAGCTATGTCGGCCATCCTCTGATCGAGCAGTTGTCGTCGCTGCGCCCGAATGCGCAGGAGGCTGCGCGCCGCGCCGCGCCGCCTCCTGTGTTGCTGCTCTTGCCCGGCAGCCGCCGCGGCGAGATCCGTCATCATATGCCGGTGTTCGGCGAGACGCTGGCGATGCTCGCGGCGCAGGGGCTTGCGATTGATGCAGTGCTGCCGACCATGCCGCATCTGCTGGAGGCGGTGAACGCATCGGTCGCGACCTGGCCGGTGAAGCCGCGCATCGTGGTCGGCGAAGACGACAAGCGCGCTGCGTTCCGCGTCGCGCGGGCTGCGCTGGCCAAGTCCGGCACGGTGACGCTCGAGCTTGCGCTGGCCGGCGTGCCGATGGTCGCGGTCTATCGTGGCGGCGCGGTCGAGGCGTTCATCGCGCGCCGCGTGGTGCGCGTGTCCTCGATCATCCTCGCCAATCTCGTGCTCGGCGAGAATGTCATTCCCGAACTCTTGCAGGAGGAGTGCGCGGCGGAGGTTATCGTGCCGAAGCTGTGCGAGGTGCTCGGCGACACGCCGCTGCGCCGCCGGGAACTCGAAGCCTTCGCGCGGCTCGATGCGGTGATGGAAACCGGCCCGCACTCGCCGAGCGAGGCGGCCGCGGACATCGTGATCAGGATGCTCGGCTGA
PROTEIN sequence
Length: 385
VSAPRKVFLIATEASGDHLGGALMRELHARLGAGVGFEGIGGRDMTAAGLVSQFPIDDLAIVGFAGVAKQLPMLLRRIREATRAVLAARPDVLVIIDSPDFTHRVARRVRAADPTIPIVNYVSPTVWAWRPGRARAMARYVDHVLALLPFEPQEHLALGGPPCSYVGHPLIEQLSSLRPNAQEAARRAAPPPVLLLLPGSRRGEIRHHMPVFGETLAMLAAQGLAIDAVLPTMPHLLEAVNASVATWPVKPRIVVGEDDKRAAFRVARAALAKSGTVTLELALAGVPMVAVYRGGAVEAFIARRVVRVSSIILANLVLGENVIPELLQEECAAEVIVPKLCEVLGDTPLRRRELEAFARLDAVMETGPHSPSEAAADIVIRMLG*