ggKbase home page

SCN18_30_10_14_R3_B_scaffold_2082_9

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(12318..12638)

Top 3 Functional Annotations

Value Algorithm Source
LexA repressor (EC:3.4.21.88) similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 106.0
  • Bit_score: 205
  • Evalue 6.00e-51
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 106.0
  • Bit_score: 205
  • Evalue 2.30e-50
LexA repressor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9M0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 106.0
  • Bit_score: 205
  • Evalue 1.60e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ACCCGCAGCCACACCATCAGCGTGCCGCCCGACATGCTCGGCTCCGGCGAGCACTACGCGCTGGAAGTGCGCGGCGACTCGATGGTGGAAGCCGGCATTCTCGACGGCGACATGGCGCTGATCCAGAAGAACGACAGCGCCGACACCGGCGACATCGTGGTGGCGCTGATCGACGAGGAGGAAGCCACGCTCAAGCGTTTCCGCCGCCGCGGCGCCTCCATCGCGCTGGAGCCGGCCAATGCCGCCTACGAGGTCCGCATCCTGCCGCCCAACCGCGTCCGCATCCAGGGCAAGCTGATCGGGCTGTACCGGAAGTATTGA
PROTEIN sequence
Length: 107
TRSHTISVPPDMLGSGEHYALEVRGDSMVEAGILDGDMALIQKNDSADTGDIVVALIDEEEATLKRFRRRGASIALEPANAAYEVRILPPNRVRIQGKLIGLYRKY*