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SCN18_30_10_14_R3_B_scaffold_2823_4

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 2039..3298

Top 3 Functional Annotations

Value Algorithm Source
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267) similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 407.0
  • Bit_score: 687
  • Evalue 1.60e-195
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183}; Short=DXP reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000255|HAMAP-Rule:MF_00183};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00183}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 407.0
  • Bit_score: 687
  • Evalue 7.80e-195
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=2 Tax=Oligotropha carboxidovorans RepID=DXR_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 407.0
  • Bit_score: 687
  • Evalue 5.50e-195

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGGCGTCGGCCGCGGTTTCATGGTTTGGTGATGCGATGAATGCTGTTCCGCTGCGTAAAAGCGAGGTCACGCCGCATGGCGACCGGGTGGTGACTATCCTCGGCGCCACCGGCTCGATCGGCCAGAGTACGGTCGATCTGGTGCGGCGCTCGAACGGCAGGTTTCGCATCGAGGCGCTGACCGCGCACAGCAATGTCGCCGAGCTCGCCAAACTCGCGCGCGAACTCGGCGCGACCTACGCCGCCATCGCGGACGAAGCGCTTTATCAGGATCTGAAGGACGCGCTCGCCGACTCCGGCATCGAAGCCGGCGCGGGCGAGGGGGCGCTGGTGGAAGCGGCGTTGCGCCCGGCCAACTGGGTGATGGCGGCGATGAGCGGCGCGGCCGGCCTCAAGCCGGCGATGGCCGCCGCCGGGCGCGGCCAGATCGTGGCGCTCGCCAACAAGGAGTGTCTGGTCTGCGCCGGCGAGGTGTTCATGCGCCACGCCGCGGCGAGCAGTGCCACGGTGCTGCCGGTCGATTCCGAGCATAACGCGATCTTCCAGGCGCTCGGCGCCGGGCAGCCCGAGCATCTGGTGCGCATCATTCTCACCGCGTCGGGCGGGCCGTTCCGCACCGCGACGCGCGAGCAGATCGAGAATGCGACGGTGGAGCAGGCGCTCAAGCATCCGAACTGGAGCATGGGCCGCAAGATCACCATCGATTCCGCGACTATGTTCAACAAGGCGCTCGAGATCATCGAGGCGTTTCACCTGTTCGAGCTGCGCGCCGACCAGATCGACGTGCTGGTGCACCCGCAGTCGATTATCCATGGCCTTGTCGAATTCGCCGATCGCTCGGTGGTGGCGCAGATGGGCGCGCCGGACATGCGCACGCCGATCGCCCATTGCCTGGCGTGGCCGGAGCGGATCGAGGGTCCGGCAACCCAGCTCGATCTTGCCAGCCTCGGTCAGCTTACTTTCGAGGCGCCCGACCCGGTGCGGTTTCCGGCGCTGCGTCTGGTGCGCGAGGCGCTGCAGCAGGGCGGGGCGGCGCCGACCGTGCTCAACGCCGCCAACGAGGTGGCGGTCGCGGCGTTTCTGGACCGCAAGATCCCGTTCGGCGGCATCGCGCGTCTGGTCGAGGCGACCCTTGAGATGATGGTGAGGGAAGGTGCGGCCGGCGCGCCGGGCAATGTCGAGGACGCGCTCGCCGTTGACCATACCGCGCGAAATAATGCGGCCGCCCTCTTGCCTGAAATTGCCTTAAAGGCATCGTAG
PROTEIN sequence
Length: 420
MASAAVSWFGDAMNAVPLRKSEVTPHGDRVVTILGATGSIGQSTVDLVRRSNGRFRIEALTAHSNVAELAKLARELGATYAAIADEALYQDLKDALADSGIEAGAGEGALVEAALRPANWVMAAMSGAAGLKPAMAAAGRGQIVALANKECLVCAGEVFMRHAAASSATVLPVDSEHNAIFQALGAGQPEHLVRIILTASGGPFRTATREQIENATVEQALKHPNWSMGRKITIDSATMFNKALEIIEAFHLFELRADQIDVLVHPQSIIHGLVEFADRSVVAQMGAPDMRTPIAHCLAWPERIEGPATQLDLASLGQLTFEAPDPVRFPALRLVREALQQGGAAPTVLNAANEVAVAAFLDRKIPFGGIARLVEATLEMMVREGAAGAPGNVEDALAVDHTARNNAAALLPEIALKAS*