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SCN18_30_10_14_R3_B_scaffold_2922_7

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 7794..8918

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 365.0
  • Bit_score: 691
  • Evalue 7.40e-197
2-isopropylmalate synthase {ECO:0000255|HAMAP-Rule:MF_01025}; EC=2.3.3.13 {ECO:0000255|HAMAP-Rule:MF_01025};; Alpha-IPM synthase {ECO:0000255|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000255|HAMAP-Rule:MF_01025}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 365.0
  • Bit_score: 691
  • Evalue 3.70e-196
2-isopropylmalate synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=LEU1_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 365.0
  • Bit_score: 691
  • Evalue 2.60e-196

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGACCACCGCTACTTCCTCCGGCACCACGTCCGGCACGTCCGCGTCGGCAAAAGACCGCGTCGTCATTTTCGACACCACGTTGCGCGACGGCGAGCAGTGCCCCGGCGCCACCATGACCCATGAGGAAAAGCTGGAAGTCGCCGAACTGCTCGACGGCATGGGCGTCGATATCATTGAGGCCGGCTTTCCGATCGCCTCGGTCGGCGATTTCGAGGCGGTCGCCGAGATTGCCAGGAATGCCAAAAACGCGGTGATCGCGGGTCTGGCCCGTGCCATTCCCGGCGACATCGCCCGCGCCGGCGAGGCGGTGCGCCATGCCCGGCGCGGCCGCATCCACACCTTCGTTTCCACCTCGCCGATCCATCTGGCGCACCAGATGCGCAAGAGCGAGGCCGAGGTGCTGGAGATCATCACCGCGACGGTGGCGCAGGCCCGCAACCTGGTCGAGGACGTCGAATGGTCGGCGATGGACGCGACCCGCACCCCGATCGACTATCTGTGCAAGTGCGTTGAGACCGCGATCGCGGCCGGCGCCACCACCATCAACCTGCCGGACACCGTGGGCTATGCGGTGCCGGACGAATACCGGCGCATGTTCAAGACCGTGCGCGAGCGGGTGCCGAACGCCGACAAGGCGATCTTCTCGGTGCATTGCCATGACGATCTGGGTCTGGCCGTCGCCAACTCGCTGGCCGGCGTCGAGGGCGGCGCGCGCCAGATCGAATGCACCGTCAACGGCATCGGCGAGCGGGCGGGCAACGCCGCGCTGGAAGAAGTCGTGATGGCGATCAAGACCCGCGGCGACGTCATGCCGTACTGGTGCAATGTCGAGAGCACCATGCTGACCCGCGCCTCCAAGCTGGTGTCGGCGGCGACCTCGTTCCCGGTGCAGTACAACAAGGCGATCGTCGGACGGAATGCGTTCTCGCACGAGAGCGGCATCCATCAGGACGGCATGCTGAAGAACGCCCAGACCTACGAGATCATGACGCCGGAGAGCGTCGGCGTGAAGCAGACCTCGCTGGTGATGGGCAAGCATTCCGGCCGCCACGCCTTCCAGCACAAGCTGGAGGAACTGGGCTACAAGCTGGCCGAGAACCAGTTGCAGGATGCGTTCGTGCGC
PROTEIN sequence
Length: 375
MTTATSSGTTSGTSASAKDRVVIFDTTLRDGEQCPGATMTHEEKLEVAELLDGMGVDIIEAGFPIASVGDFEAVAEIARNAKNAVIAGLARAIPGDIARAGEAVRHARRGRIHTFVSTSPIHLAHQMRKSEAEVLEIITATVAQARNLVEDVEWSAMDATRTPIDYLCKCVETAIAAGATTINLPDTVGYAVPDEYRRMFKTVRERVPNADKAIFSVHCHDDLGLAVANSLAGVEGGARQIECTVNGIGERAGNAALEEVVMAIKTRGDVMPYWCNVESTMLTRASKLVSAATSFPVQYNKAIVGRNAFSHESGIHQDGMLKNAQTYEIMTPESVGVKQTSLVMGKHSGRHAFQHKLEELGYKLAENQLQDAFVR