ggKbase home page

SCN18_30_10_14_R3_B_scaffold_2924_5

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 5574..6932

Top 3 Functional Annotations

Value Algorithm Source
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 452.0
  • Bit_score: 745
  • Evalue 2.60e-212
tig; trigger factor (EC:5.2.1.8) similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 452.0
  • Bit_score: 733
  • Evalue 3.50e-209
Trigger factor n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBZ7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 452.0
  • Bit_score: 745
  • Evalue 1.80e-212

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1359
ATGCAGGTGAAAGAGACCCTTGCCGAGGGACTGAAGCACGAATTCGAGATCAACGTTTCCGCCTCGGAGATCGACGCCAAGGTGGATGCACGCCTTGCCGACATGAAGGACAAGGTCCGGCTCAACGGTTTCCGCCCCGGCAAGGTGCCGCTCGCGCATCTCAAGAAGGTCTATGGCCGCTCCGTCGCCGCCGAGGCGCTCGAGGAGATGATCCGCGAGACCAATACGCGCATCTTCACCGAGCGCAGCCTGCGCGTCGCCAACGAGCCCAAGGTGACGATGCCGACCGAGCAGACGGAGATCGAGGAGATCCTCGCCGGCAAGGCCGACCTGACCTATTCGGTCGCGATCGAAGTCGTGCCGCCGATCACGCTCGCGGACTTCAAGACCTTCAATGTCGAAAAGCCGGTCGCCGACATCACCGACGCCGACGTCGACGAGGCGATCAAGCGCATCGCTGACCAAAATCGTCCCTACGCTGCGAAGGGCGAGGGCGCCAAGGCCGAATCCGGCGACCGCGTCACCGTCGCCTTCAAGGGCACCATCGACGGCGTCGCCTTCGAGGGCGGCACCGGCGAGAACATTCCGGTGGTGATCGGCTCCAACACCTTCATTCCGGGCTTCGAGGATCAGTTGATCGGCATCGCGGCGGGCGAGACCCGCACCGTCAAGGCGTCGTTCCCGCAGAACTATGCCGCGCCGAATCTCGCCGGCAAGGATGCCGAGTTCGAGACCACTGCGAGCCTGATCGAGGCGCCGCAGGACTCGGTGGTGGACGAGGAGTTCGCCAAGAACCTCGGCCTCGAATCGCTCGACAAGCTCAAGGAAGCGATGCGCGAGCGCATGACCCAGGAATTCGCCGGCGCAACCCGCCAGAAGGTCAAGCGCAAGCTGCTCGACCAGCTCGACGAGACGCATCATTTCGAGGCGCCGTCCTCGCTGGTGAATGACGAATTCGAACTGATGTGGAATTCGATCCAGTCCGAGATGGCCTCCTCCGCGCGCACCTTCGCCGACGAGAACACCACCGAGGAAGCCGCCAAGGAGGAGTATCGCAAGATCGCCGACCGCCGCGTGCGCCTTGGCCTTGTGCTCTCCGAGATCGGCGAGAAGAACAAGATCACCGTGACCGACGACGAGGTCAGCCGTGCCGTGATCGAGCGCGCCCGCCAGATGCCGGGCCGCGAGAAGGAAGTGTGGGACTACTACCGCAGCAATCCGGGCGCGGTGGCCCAGCTTCGCGCGCCGATCTTCGAGGACAAGGTGATCGATTTCATCCTCGAACTCGCCAATGTGACCGAGAAGAAGGTCTCGCGCGAGGATCTGTTCAAGGACGAGGACGAGAAGGACGCGGCCTGA
PROTEIN sequence
Length: 453
MQVKETLAEGLKHEFEINVSASEIDAKVDARLADMKDKVRLNGFRPGKVPLAHLKKVYGRSVAAEALEEMIRETNTRIFTERSLRVANEPKVTMPTEQTEIEEILAGKADLTYSVAIEVVPPITLADFKTFNVEKPVADITDADVDEAIKRIADQNRPYAAKGEGAKAESGDRVTVAFKGTIDGVAFEGGTGENIPVVIGSNTFIPGFEDQLIGIAAGETRTVKASFPQNYAAPNLAGKDAEFETTASLIEAPQDSVVDEEFAKNLGLESLDKLKEAMRERMTQEFAGATRQKVKRKLLDQLDETHHFEAPSSLVNDEFELMWNSIQSEMASSARTFADENTTEEAAKEEYRKIADRRVRLGLVLSEIGEKNKITVTDDEVSRAVIERARQMPGREKEVWDYYRSNPGAVAQLRAPIFEDKVIDFILELANVTEKKVSREDLFKDEDEKDAA*