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SCN18_30_10_14_R3_B_scaffold_1168_4

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 3022..3831

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NVW5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 223.0
  • Bit_score: 191
  • Evalue 8.00e-46
Uncharacterized protein {ECO:0000313|EMBL:EHJ59897.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.3
  • Coverage: 214.0
  • Bit_score: 154
  • Evalue 1.50e-34
transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 206.0
  • Bit_score: 101
  • Evalue 3.10e-19

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Taxonomy

SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9 → SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9 → SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGGCCGAAAGTAGGGTCTGGAAACGGAAAATTAGAACGCGCGCGCGCCTGGTGGAGTCGGTCTACCTAGAGATGTCTGCCAAAGGCGTGGACCACGCCGCAGTGCAGGAGATTACCGACAGGGCCGATGTAGGTCTCGGCACCTTCTACTGCTATTTCTCTTCGAAGGATGAAATCACGACATGTGCGCTGGATTGCGTGATCCACAATCTCGGCCAGCGCAACCAGATGGCCAATGATGCTGCTAACATTGCCGACGCGTTGGCAGTTATCTCGAACTCGGTACGTCTGACCGCGATTGAGATCCTGACTGACCCAATGTGGCGCCTGTGGCTGAGACGAACTGATCTGATGGCGCGCCGGATGCATGTAGGCTTCCGCCCCTTTGGCATCCGCGATCTTTCTGCGGCACAAACTGCGGGCCAGGTAATTTTTCCCGACGGCCAAATAGAGGCGGCTTGGGGATATCTGATCTGGCTTCTGGCTGGGGCCATAACCGATATTGTCGAGGGCGTCCGCGCGGCCGCGTCCGATATGGCCGAAGCCATCATGCGGGTAGTTGGTGCGTCAACCGCCGATGCGAAGCGCCTGTCGTCGCTCGCTCTCCCCACGCTTCCAGCCGCAATGATTGACTTCACCTACACTCCGAACAAACCAGAACAGATAGATCTCGTGCTGGAGAAGTATGCGCGACGTTGCAGATCGGATTCTTCATACCCGATGAGCGGTGGGCGAGTCCACCCTTTGCGGCGGGGCTCGGTCTGCGCGAGATGCCATCGTCGAAGCAACAACAAACGAAGGACCAAATGA
PROTEIN sequence
Length: 270
MAESRVWKRKIRTRARLVESVYLEMSAKGVDHAAVQEITDRADVGLGTFYCYFSSKDEITTCALDCVIHNLGQRNQMANDAANIADALAVISNSVRLTAIEILTDPMWRLWLRRTDLMARRMHVGFRPFGIRDLSAAQTAGQVIFPDGQIEAAWGYLIWLLAGAITDIVEGVRAAASDMAEAIMRVVGASTADAKRLSSLALPTLPAAMIDFTYTPNKPEQIDLVLEKYARRCRSDSSYPMSGGRVHPLRRGSVCARCHRRSNNKRRTK*