ggKbase home page

SCN18_30_10_14_R3_B_scaffold_1168_26

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 20782..21363

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VFB1_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 181.0
  • Bit_score: 259
  • Evalue 2.20e-66
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 181.0
  • Bit_score: 259
  • Evalue 6.30e-67
Regulatory protein TetR {ECO:0000313|EMBL:ADU42899.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 181.0
  • Bit_score: 259
  • Evalue 3.10e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGGCGAAAACGATCACCGAACGCGCGGACATCCTGCCGGCTTTGGCCGAGGTGTTCCGCGCGCATGGCTATGAAGGCGCGACGCTGGCGCTGCTGTCGGAGGCAAGCGGCCTCGGCAAGGGCAGCCTCTATCACTTCTTTCCCGGCGGGAAGGAGCAGATGTGCGCCGAGGTGCTGGCGGAGATCGACAGCTGGTTCGAAACCAACATCTTCCAGCCGCTGCTCAAGGGCGAGGATCCGGAAGAAGCGATCGCCGCGATGATCGGCGCGGCGGAGCGCTATTTCAAATCCGGGCGGCGGGTGTGCCTCGTTGGCGTGGTCGCGCTCGGCGCGGCGCGAGACGCCTTCGCCGAACCGGTGCGGGCCTATTTCAAGCGCTGGGCCGATGCGCTGGCCTCTGCTTTGCGCCGCTGCGGGTTGTCCGCGGCGACGGCGCGCCGCCGCGCCGAGGACGCGATGCTGGTGATCCAGGGCGCGCTGGTGATCGCGCGCGGGCTCGACGATCCGAAGGTGTTCTCCCGCGCCATGGCTGATCTGAAGGGCCGCTTGCTCGCTGATCTGGCGAGCGCCGCGCCGGCCTAA
PROTEIN sequence
Length: 194
MAKTITERADILPALAEVFRAHGYEGATLALLSEASGLGKGSLYHFFPGGKEQMCAEVLAEIDSWFETNIFQPLLKGEDPEEAIAAMIGAAERYFKSGRRVCLVGVVALGAARDAFAEPVRAYFKRWADALASALRRCGLSAATARRRAEDAMLVIQGALVIARGLDDPKVFSRAMADLKGRLLADLASAAPA*