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SCN18_30_10_14_R3_B_scaffold_1449_10

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 10336..11646

Top 3 Functional Annotations

Value Algorithm Source
glyA; serine hydroxymethyltransferase (EC:2.1.2.1) similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 430.0
  • Bit_score: 817
  • Evalue 1.00e-234
Serine hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000255|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000255|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000255|HAMAP-Rule:MF_00051};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 430.0
  • Bit_score: 817
  • Evalue 5.20e-234
Serine hydroxymethyltransferase n=2 Tax=Oligotropha carboxidovorans RepID=GLYA_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 430.0
  • Bit_score: 817
  • Evalue 3.70e-234

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1311
ATGAGCTCGTCCAGTTCTTCCGCCAAGACCGCGTCTGCCCCGGACACCTTTTTCACTGCGTCGCTGGCGCAGGCCGATCCCGAGATCGCCGATGCGATCAAGGGCGAACTCGGTCGCCAGCAGCATGAGATCGAGCTGATCGCGTCCGAGAACATCGTCAGCCGCGCCGTGCTGGAGGCGCAGGGCTCGGTGATGACCAACAAGTACGCCGAAGGCTATCCGGGCAAGCGCTACTATGGCGGCTGCGAATGGGTCGACGTCGCCGAGACGCTGGCGATCGAGCGCGCCAAGAAACTGTTCGGCGCGAACTTCGCCAACGTGCAGCCGAACTCCGGCAGCCAGATGAACCAGGCCGTGTTCCTGGCGCTGCTGCAGCCCGGCGACACCTTCATGGGTCTCGACCTTGCCGCCGGTGGCCATCTCACCCACGGCTCGCCGGTCAACATGTCCGGCAAGTGGTTCAAGGCGTCGCACTACACCGTGCGCCGCGAGGACCAGATCATCGACATGGATGAGGTGGCGAAGCAGGCCGAGCAGGTGAAGCCGAAGCTGATCATCGCCGGCGGCTCGGCCTATTCGCGGCCGTGGGACTTCAAGCGCTTCCGCGAGATCGCCGACAGCGTCGGCGCCTATTTCCTGGTGGACATGGCGCATTTCGCGGGTCTGGTCGCCGGCGGCGCGCATGCCTCGCCGGTACCGTATGCCCACGTCACCACCACCACCACGCACAAGTCGCTGCGCGGCCCGCGCGGCGGCCTGATCCTCTCCAACGACGAGGAAATCGCCAAGAAGATCAACTCGGCGATCTTCCCCGGCCTGCAGGGCGGCCCGCTGATGCATGTGATCGCCGCCAAGGCGGTGGCGTTCAAGGAAGCGCTGAGCCCCGACTTCAAGGTCTATGCCAGGAACATCGTCGAGAACGCCCGGGCGCTGGCCGAGTCGCTGCGCGGCCATGGTTTTGAGATCGTCTCGGGCGGCACCGACAACCATCTGATGCTGGTCGACCTGCGACCCAAGGGCCTCAAGGGCAACATCTCGGAGCGCGCGCTGGTGCGCTCGGCCATCACCTGCAACAAGAACGGCATTCCGTTCGATCCTGAAAAGCCGTTCGTCACCTCGGGTCTGCGTCTCGGCACCCCGGCGGCGACCACGCGCGGGTTCGGCGTCGCCGAATTCAAGCAGGTCGGTGCGCTGATCGCCGAAGTGCTGAACGCGGTGGCGCAGTCGCCGGACGGCTCGGCGCCGGGCGTCGAGGCGTCGGTGAAGCAGCGGGTGCGCGAACTCACCGATCGTTTCCCGATCTATCCGTAA
PROTEIN sequence
Length: 437
MSSSSSSAKTASAPDTFFTASLAQADPEIADAIKGELGRQQHEIELIASENIVSRAVLEAQGSVMTNKYAEGYPGKRYYGGCEWVDVAETLAIERAKKLFGANFANVQPNSGSQMNQAVFLALLQPGDTFMGLDLAAGGHLTHGSPVNMSGKWFKASHYTVRREDQIIDMDEVAKQAEQVKPKLIIAGGSAYSRPWDFKRFREIADSVGAYFLVDMAHFAGLVAGGAHASPVPYAHVTTTTTHKSLRGPRGGLILSNDEEIAKKINSAIFPGLQGGPLMHVIAAKAVAFKEALSPDFKVYARNIVENARALAESLRGHGFEIVSGGTDNHLMLVDLRPKGLKGNISERALVRSAITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFKQVGALIAEVLNAVAQSPDGSAPGVEASVKQRVRELTDRFPIYP*