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SCN18_30_10_14_R3_B_scaffold_2970_5

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(6279..6833)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJW9_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 184.0
  • Bit_score: 344
  • Evalue 3.90e-92
RNA polymerase sigma factor protein similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 184.0
  • Bit_score: 344
  • Evalue 1.10e-92
Putative RNA polymerase sigma factor protein {ECO:0000313|EMBL:AEI05254.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 184.0
  • Bit_score: 344
  • Evalue 5.40e-92

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGACAAAGGAGTCCGACCTCAAAGCACTCATGACGGCGAGCCTCGAAGGCGATTCCAATGCGCATCGATCGCTGCTGACGGCTTTGAGTGGACATCTGCGAAGCTACTACAAGAGCAGACTTTTGCGATCCGGACGCACGGCCGAAGAAACTGAAGACCTCGTGCAGGAGGCGTTGATCGTCATCCACACGCAACGTCACACCTACGATCCCGAGCAGCCGCTGACGCCGTGGGTATACGCCATTGCCCGCTACAAGCTGATCGACCATTTGCGACGCACTAGGGCCACGACGGCGGACGTACCTCTGGAGAACGCCGATGACATCTTGGCATCGGACGACAACGCCGCCGCCGAAAGTCAATTCGATCTTGCCAAGCTGTTGGAAAGGTTGCCCGAAAGAATGAGACTTTCGCTCCAATACGTGAAACTCGAAGGCTTGAGCGTGGCCGAGGCCGCCGATCGCAGCGGGATGTCGCAATCCGCCGTCAAAGTGAACGTTCACCGCGGGCTGAAAATTCTCACGGCGTTGATTACTCGGGAGACAAAGGCGTGA
PROTEIN sequence
Length: 185
MTKESDLKALMTASLEGDSNAHRSLLTALSGHLRSYYKSRLLRSGRTAEETEDLVQEALIVIHTQRHTYDPEQPLTPWVYAIARYKLIDHLRRTRATTADVPLENADDILASDDNAAAESQFDLAKLLERLPERMRLSLQYVKLEGLSVAEAADRSGMSQSAVKVNVHRGLKILTALITRETKA*