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SCN18_30_10_14_R3_B_scaffold_2134_1

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 3..1700

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=2 Tax=Bradyrhizobiaceae RepID=F7QFT6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 571.0
  • Bit_score: 1040
  • Evalue 0.0
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 571.0
  • Bit_score: 1040
  • Evalue 0.0
rpoD2; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 567.0
  • Bit_score: 1001
  • Evalue 5.10e-290

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1698
GTCGAGCTGTTGTCGCGCGAGGGCGAAATCGCCATCGCCAAGCGCATCGAGGCCGGCCGCGAGGCGATGATCGCCGGGCTGTGCGAAAGCCCGCTGACTTTCCAGGCCATCATCATCTGGCGCGACGAGCTCAACGAGGGAAAGATCTTCCTGCGTGACATCATCGACCTGGAAGCGACCTACGCCGGGCCGGACGCCAAGAGCAACATGAACCCGAACATGATCGCGGGCCCCGCCGGGCCGGACGGTCAGCCGACCAATGCGGTCGTCAACGGCGACGGCACCGTGCAGGTGATCGCCGCCGTCGCGCCCGCGCCGCCGGCCGCGCCGCCTTCGCCGACGCCGTTCCGTCCCGCGCCCGCCGCGGGCGAAGGCGCCGCCGCGCCCGAGGAGGACGAGGACGACGAGTTCGAGAACCAGATGTCGCTCGCCGCGATCGAGGCCGAGCTCAAGCCGAAGGTCGTGGAGATCTTCGACCGCATCGCCGACAGCTACAAGAAGCTGCGCCGTTTGCAGGAGCAGGACATCCAGAACCAGCTTGAAAGCGCCTCGCAGGGGCCCTCGCTCTCGCCCTCGCAGGAGCGCAAGTACAAGAAGCTGAAGGACGAGATCATCGTCGAGGTGAAGTCGCTGCGCCTCAACCAGGCGCGTATCGACAGCCTGGTCGAGCAACTCTACGACATCAACAAGAAGCTGGTGTCCTATGAAGGCCGTCTGTTCCGCCTCGGCGACAGCCACGGCGTCGGCCGCGAGGACTTCCTCAAGAATTACACCGGTTCGGAGCTCGATCCGCGCTGGCTCAACCGCGTCTCCAAGCTCGCGGCCAAGGGCTGGAAGAACTTCGTCGCGGTGGAGAAGGACCGCATCAAGGAGCTGCGCCACGAGATCCAGCAGCTTGCGGCGCTGACCGGGCTTGAGATCGGCGAATTCCGCAAGATCGTGCACTCGGTGCAGAAGGGCGAGCGCGAGGCGCGGCAGGCGAAGAAGGAAATGGTGGAGGCCAACCTGCGCCTCGTCATCTCGATCGCCAAGAAATACACCAACCGCGGCCTGCAGTTCCTCGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTCGACAAGTTCGAGTACCGCCGCGGCTACAAGTTCTCGACCTATGCGACCTGGTGGATCCGGCAGGCGATCACCCGCAGCATTGCGGACCAAGCCAGAACCATCCGCATCCCGGTGCACATGATCGAGACCATCAACAAGATCGTGCGCACCTCGCGCCAGATGCTCAACGAGATTGGCCGTGAGCCGACGCCGGAAGAGCTGGCCGAAAAGCTCGGCATGCCGCTGGAGAAGGTGCGCAAGGTTCTCAAGATCGCCAAGGAGCCGCTGTCGCTGGAGACGCCGGTGGGTGACGAGGAAGACAGCCACCTCGGCGACTTCATCGAGGACAAGAACGCGGTGCTGCCGATCGACGCGGCGATCCAGTCGAACCTGCGCGAGACCACGACGCGCGTGCTCGCCTCGCTCACCCCGCGCGAGGAGCGTGTGCTGCGCATGCGTTTCGGCATCGGCATGAACACCGACCATACGCTGGAGGAAGTCGGCCAGCAGTTCTCGGTGACGCGCGAACGCATCCGTCAGATCGAGGCGAAGGCGCTACGCAAGCTCAAGCACCCCTCGCGCAGCCGCAAACTGCGATCGTTCCTCGACAACTGA
PROTEIN sequence
Length: 566
VELLSREGEIAIAKRIEAGREAMIAGLCESPLTFQAIIIWRDELNEGKIFLRDIIDLEATYAGPDAKSNMNPNMIAGPAGPDGQPTNAVVNGDGTVQVIAAVAPAPPAAPPSPTPFRPAPAAGEGAAAPEEDEDDEFENQMSLAAIEAELKPKVVEIFDRIADSYKKLRRLQEQDIQNQLESASQGPSLSPSQERKYKKLKDEIIVEVKSLRLNQARIDSLVEQLYDINKKLVSYEGRLFRLGDSHGVGREDFLKNYTGSELDPRWLNRVSKLAAKGWKNFVAVEKDRIKELRHEIQQLAALTGLEIGEFRKIVHSVQKGEREARQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLKIAKEPLSLETPVGDEEDSHLGDFIEDKNAVLPIDAAIQSNLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN*