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SCN18_30_10_14_R3_B_scaffold_2173_3

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2496..3626)

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter n=1 Tax=Afipia birgiae RepID=UPI00030F7D0D similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 383.0
  • Bit_score: 677
  • Evalue 6.70e-192
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:EKS34791.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 383.0
  • Bit_score: 666
  • Evalue 2.20e-188
C4-dicarboxylate ABC transporter similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 378.0
  • Bit_score: 655
  • Evalue 7.70e-186

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGACGTCACAGAAGAAAGATATCGCCAGCCGCCGTCAGTTCCTGAAAGTTGCCGCCGCCGGCGCCGCCACCGTGGCTGCGCCTGCCGTCGTGCAGGCCCAGGGTCCTGTCAACATGCGCTTCCAGAGCACATGGCCGTCCAAGGATATCTTCCACGAATACGCGCTCGACTACGCCAAGAAGGTCAACGATATGACCGGCGGCGATCTCAAGATCGAAGTGCTGCCGGCGGGTGCCGTCGTGCCGGCGTTCGGTCTGCTCGAAGCGGTGTCGAAGGGCACGCTCGATGGCGGCCACGGCGTGCTGGTCTATCACTACGGCAAGCAGAACGCGCTGGCGCTGTGGGGTTCGGGTCCGGGCTACGCCATGGACGCCAACATGCTGCTGGCCTGGCACAAATACGGCGGCGGCAAGGAGCTGCTCGACAAGCTTTACAAGTCGATCGGCGCCAACGTGGTGTCCTTCCCGTACGGCCCGATGCCGTCGCAGCCGCTCGGCTGGTTCAAGAAGCCGGTCACCAAGGTCGAGGACATGAAGGGCCTCAAGTTCCGCACCGTCGGCATCTCGATCGACGTGTTCTCCGGAATGGGTCTTGCCGTGAACGCGCTCCCTGGCGGCGAAATCGTCGCGGCGATGGACCGCGGCCTGCTCGACGCGGCCGAGTTCAACAACGCCTCGTCCGACCGCATCCTCGGCTTCACCGACGTGTCGAAGGTCTGCATGCTGCAGAGCTATCACCAGAACTCCGAGCAGTTCGAGGTGATGTTCAACAAGAACAAGTATGACAGCCTGCCGGAGAAGATCCGGGCGATTCTCGACAACGCCGCCGAGGCGGCCAGCGCCGATATGTCCTGGAAGGCAATCGACCGTTATTCCAAGGACTACGTCGAGATGCAGACCAAGGACAAGGTCAAGTTCTACAAGACGCCGGACTCCGTGCTGCAGAAGCAGCTCGAGGTCTACGATCAGGTCGTCGAGAAGAAGTCGGCCGAGAATCCGCTGTTCAAGGAAATCGTCGCCTCGCAGATGGCCTTCGCCAAGCGCGCGACGCAGTGGGAGCAGGATACGATCACCAACCGTCGTATGGCCTACAACCACTATTTCGGCCCCAACGCGAAGAAGAAGACCTAA
PROTEIN sequence
Length: 377
MTSQKKDIASRRQFLKVAAAGAATVAAPAVVQAQGPVNMRFQSTWPSKDIFHEYALDYAKKVNDMTGGDLKIEVLPAGAVVPAFGLLEAVSKGTLDGGHGVLVYHYGKQNALALWGSGPGYAMDANMLLAWHKYGGGKELLDKLYKSIGANVVSFPYGPMPSQPLGWFKKPVTKVEDMKGLKFRTVGISIDVFSGMGLAVNALPGGEIVAAMDRGLLDAAEFNNASSDRILGFTDVSKVCMLQSYHQNSEQFEVMFNKNKYDSLPEKIRAILDNAAEAASADMSWKAIDRYSKDYVEMQTKDKVKFYKTPDSVLQKQLEVYDQVVEKKSAENPLFKEIVASQMAFAKRATQWEQDTITNRRMAYNHYFGPNAKKKT*