ggKbase home page

SCN18_30_10_14_R3_B_scaffold_2211_7

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 5720..6613

Top 3 Functional Annotations

Value Algorithm Source
LysR family regulatory helix-turn-helix protein 69 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T5R2_ALCXX similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 285.0
  • Bit_score: 375
  • Evalue 4.30e-101
LysR family regulatory helix-turn-helix protein 69 {ECO:0000313|EMBL:EGP44337.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 285.0
  • Bit_score: 375
  • Evalue 6.00e-101
transcriptional regulator, LysR-family similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 285.0
  • Bit_score: 367
  • Evalue 3.30e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGGCTCGCGGTGGGAATGGCGTGGAAAGTCCTGACCGCCAGCTTCGATATTTCGTCAAGATCGCCGAGCTTAAGTCGTTATCGCGCGCCGCTGAAATCCTCGATCTCACCCAGTCGGGTATCAGTCGCCAGTTGTCCTCGCTTGAGGCGTATGTCGGCAAGCCGCTGTTCCTGCGCACCGGGCGCGGTGTCGAGTTGACCGATGCGGGCAAGAAGCTGCTCATGGCGGCCAAGCCCGCTTACGCCGGCATCGACGAGGCGCTCGACACCATTCGCGATAGAGAAGGTGTCACGCAGGGCCACGTCCGTCTCGCGGTGATCCACACGCTCAGCTATTATTTCATGACCGATGTGGTGGCCGAGTTCATCAGTCAGCGTGAGAATGTCAATCTGTCGCTGATGGGGCGAAGCTCGCCGGAAGTCGTCACTCTCGTCGAGAGCGGAAAGGCTGACATCGGTTTTGTCTATGATTCCGCGGTGGACTCGGCCGATCTGAAATCGACGCCGCTCTTCGAGGACGAGATGTGTGTGATCGCTTCGAGAAAGAGCGATCTGTGCGGTGAAATCGATCTCACCACCACGCGCCTCAGACTGGTCTGTTTCCCGCGGCATTATGCATTGCGCAGGATGTTCCAGAGCAGCGGCCTTCAGCCGGATGTCGCGGCCGAGGCCGAAACTGTCGACGCGATGCTCAAGCTGGTCTCGTCCCAGGTCGGAATCTGCGTGTTGCCATCGCAGATCCCCGAAAAGCTGCTGGTGGACTATGATTTGAAGAAACTGCCGATCGCTCAGCCGAAACTACGCCGGCGAGTGGTCGCAATCACGCGCAATGACAAGCATTTGCCTGCGCTGGTGCGGGACCTCATCAAGGTTGCGCTCGCCAAGGTCCGCTGA
PROTEIN sequence
Length: 298
MARGGNGVESPDRQLRYFVKIAELKSLSRAAEILDLTQSGISRQLSSLEAYVGKPLFLRTGRGVELTDAGKKLLMAAKPAYAGIDEALDTIRDREGVTQGHVRLAVIHTLSYYFMTDVVAEFISQRENVNLSLMGRSSPEVVTLVESGKADIGFVYDSAVDSADLKSTPLFEDEMCVIASRKSDLCGEIDLTTTRLRLVCFPRHYALRRMFQSSGLQPDVAAEAETVDAMLKLVSSQVGICVLPSQIPEKLLVDYDLKKLPIAQPKLRRRVVAITRNDKHLPALVRDLIKVALAKVR*