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SCN18_30_10_14_R3_B_scaffold_3461_3

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 749..1282

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=2 Tax=Bradyrhizobiaceae RepID=F7QPY1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 177.0
  • Bit_score: 330
  • Evalue 9.50e-88
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 177.0
  • Bit_score: 330
  • Evalue 1.30e-87
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 177.0
  • Bit_score: 320
  • Evalue 1.60e-85

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCACGCGTAGGCAAACGACCAGTCGCGATCGCATCGGGCGTCACCGCGAGCGTTGACGGGCAGACCGTCAAGGTGAAGGGGCCGAAGGGCGCGCTTCAGTATGTCGTGCACGACGATGTGTCGGTCGAGATGAAGGACGGCGCGATTCGCGTTGCTCCGCGTTTCGAGACCAAGCGCGCGCAGTCGCTGTACGGCACCTCGCGCGCCCAGATCGCCAACCTCGTCGAGGGCGTCACCAAGGGCTTCGAGAAGAAGCTGGAAATCACCGGCGTCGGCTACCGCGCTGCGCTGCAGGGCAAGAGCCTGCAACTCTCGCTCGGCTACAGCCACGACGTGGTTTATCCGGTTCCGGAGGGCATCACGATCGCGGTGCCGAAGCCGACTGAAATCACCATTGCCGGCAATGACAGCCAGCGCGTCGGCCAGGTGGCTGCCGAGATCCGCGCCTATCGTCCGCCGGAGCCGTACAAGGGCAAGGGCGTGAAGTACGCCGACGAATTCATCTTCCGCAAGGAAGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 178
MSRVGKRPVAIASGVTASVDGQTVKVKGPKGALQYVVHDDVSVEMKDGAIRVAPRFETKRAQSLYGTSRAQIANLVEGVTKGFEKKLEITGVGYRAALQGKSLQLSLGYSHDVVYPVPEGITIAVPKPTEITIAGNDSQRVGQVAAEIRAYRPPEPYKGKGVKYADEFIFRKEGKKK*