ggKbase home page

SCN18_30_10_14_R3_B_scaffold_1724_23

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 26716..27708

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S2 n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PCE7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 332.0
  • Bit_score: 609
  • Evalue 2.00e-171
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 332.0
  • Bit_score: 609
  • Evalue 2.80e-171
rpsB; 30S ribosomal protein S2 similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 332.0
  • Bit_score: 583
  • Evalue 2.50e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGGCACTACCTGATTTCTCGATGCGTCAGCTTCTGGAAGCTGGCGTTCACTTCGGCCACCAGTCGCACCGCTGGAATCCGAAGATGGCCGATTACATTTTCGGCGCCCGCAACAACATCCACATCATCGATCTCGCCCAGACCGTGCCGCTGCTGCATCGTGCGCTGCAGGCCGTGAGCGATACCGTCGCCAAGGGCGGCCGCGTGCTGTTCGTCGGCACCAAGCGCCAGGCGCAGGACAGCGTGGCCGACGCGGCCAAGCGTTCGGCGCAGTACTTCGTCAACTCGCGCTGGCTCGGCGGCACGCTGACCAACTGGAAGACGGTGTCCGGCTCGATCAAGCGCCTGCGCCAGCTCGAGGAGATGCTCTCCTCGGCGGAAGGCACGCAGTACACCAAGAAGGAACGCCTGACGCTGCAGCGCGAGCGCGACAAGCTCGACCGCTCGCTCGGCGGCATCAAGGACATGGGCGGTCTGCCCGATTTGATCTTCGTGATCGACACCAACAAGGAAGACATCGCGATCCAGGAAGCCAACCGCCTCAACATCCCGGTGGCCGCGATCGTCGATACCAACTCGGACCCGAAGGGCATCTCCTACGTGGTGCCGGGCAATGACGACGCCGGCCGCGCGATTACGCTGTATTGCGATCTGATCGCGCGCGCGGTGATCGACGGTATTTCCCGCGCCCAGGGCGGCGCCGGCGTCGATATCGGCGCGATGGCCAACCCGGCCGCCGAAGTGCTCGACGCTCCGGCGGGCGGCTTCCAGGGCCTCGCCGGCCCGCGTGGCGTTGCCGACAACCTCAAGAAGCTCACCGGCGTGTCCGGCGAGATCGAGAAGAAGCTCAACGATCTCGGCGTCTTCCATTACTGGCAGCTTGCCGAACTCGATCACGACGCCGCGCACAAGATCGGCGAAGAGGTCGGTCTGCCGGCTCGCGCCGACGCCTGGGTCTCCCAGTCCAAGGCGCTGGTCGCCGAGGCCGAGTAA
PROTEIN sequence
Length: 331
MALPDFSMRQLLEAGVHFGHQSHRWNPKMADYIFGARNNIHIIDLAQTVPLLHRALQAVSDTVAKGGRVLFVGTKRQAQDSVADAAKRSAQYFVNSRWLGGTLTNWKTVSGSIKRLRQLEEMLSSAEGTQYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEANRLNIPVAAIVDTNSDPKGISYVVPGNDDAGRAITLYCDLIARAVIDGISRAQGGAGVDIGAMANPAAEVLDAPAGGFQGLAGPRGVADNLKKLTGVSGEIEKKLNDLGVFHYWQLAELDHDAAHKIGEEVGLPARADAWVSQSKALVAEAE*