ggKbase home page

SCN18_30_10_14_R3_B_scaffold_1728_5

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 3132..4217

Top 3 Functional Annotations

Value Algorithm Source
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 358.0
  • Bit_score: 666
  • Evalue 1.20e-188
aroC; chorismate synthase AroC (EC:4.2.3.5) similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 360.0
  • Bit_score: 652
  • Evalue 6.30e-185
Chorismate synthase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXF3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 358.0
  • Bit_score: 666
  • Evalue 8.70e-189

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGTCCTTCAACACCTTCGGCCATATGTTCCGCGTCACCACCTTCGGCGAGAGTCACGGGGTGGCGCTGGGCTGCGTGGTTGATGGCTGCCCGCCGCGGCTTCCGCTGACGGCGGAGGACATCCAGCTCGATCTCGACCGCCGCCGGCCGGGCCAGTCGCGCTTCACCACGCAGCGGCAGGAGCCCGATCAGGTCAAGATCCTGTCCGGCGTGATGGACGATGCCGCTGGGCGGCAGGTGACGACCGGCACGCCGATCGCGCTGATGATCGAGAACACCGACCAGCGCTCCAAGGACTATTCCGACATCAAGGACAAGTATCGTCCCGGCCACGCCGACTTCACCTATGAAGCCAAGTACGGCATCCGCGACTATCGCGGCGGCGGGCGCTCCAGCGCGCGCGAGACCGCGGCGCGCGTCGCGGCCGGCGCGGTGGCGCGCAAGGTCATTCCCGACATCACCGTGCGCGCCGCGCTGGTGCAGATGGGGCCGCACAAGATCGACCGCGCCAACTGGGACTGGGCGGAAGTGGCGCGCAATCCGTTCTTCTGTCCGGACAAGGCCAAGGCCGAGTTCTATGCCGAGTATCTCGACGACATCCGCAAGAACGGTTCCTCGATCGGCGCGGTGGTCGAGGTGGTGGCGGAGGGCGTGCCGGCGGGTCTCGGCGCGCCGATCTATGGCAAGCTCGACAGCGATCTGGCCAGCGCGCTGATGAGCATCAATGCGGTGAAGGGCGTCGAGATTGGCGCCGGCTTCGGCGCGGCCGAGCTGCATGGCGAGGACAACGCCGACGAAATGCGCATGGGCAACACCGGCCCGGTGTTCCTGTCGAACCATGCCGGCGGCATCCTCGGCGGCATCTCCACCGGGCAGGCGGTGGTGGCGCGCTTTGCGGTGAAGCCGACCTCCTCGATCCTGACGCCGCGGCGGACCATCGATCGGAGCGGCGCCGAGACCGACATCCTGACCAAGGGCCGTCACGATCCCTGTGTCGGCATCCGCGCGGTTCCAGTCGGCGAGGCGATGGTGGCCTGCGTGCTGGCCGATCATCTCTTGCGCCATCGCGGCCAAAACGCCGGCTAA
PROTEIN sequence
Length: 362
MSFNTFGHMFRVTTFGESHGVALGCVVDGCPPRLPLTAEDIQLDLDRRRPGQSRFTTQRQEPDQVKILSGVMDDAAGRQVTTGTPIALMIENTDQRSKDYSDIKDKYRPGHADFTYEAKYGIRDYRGGGRSSARETAARVAAGAVARKVIPDITVRAALVQMGPHKIDRANWDWAEVARNPFFCPDKAKAEFYAEYLDDIRKNGSSIGAVVEVVAEGVPAGLGAPIYGKLDSDLASALMSINAVKGVEIGAGFGAAELHGEDNADEMRMGNTGPVFLSNHAGGILGGISTGQAVVARFAVKPTSSILTPRRTIDRSGAETDILTKGRHDPCVGIRAVPVGEAMVACVLADHLLRHRGQNAG*