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SCN18_30_10_14_R3_B_scaffold_3213_7

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 6411..7166

Top 3 Functional Annotations

Value Algorithm Source
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 251.0
  • Bit_score: 424
  • Evalue 9.60e-116
tpiA; triosephosphate isomerase TpiA (EC:5.3.1.1) similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 251.0
  • Bit_score: 389
  • Evalue 6.90e-106
Triosephosphate isomerase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PFK7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 251.0
  • Bit_score: 424
  • Evalue 6.80e-116

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGACCGATACGAGCCGTCCGCTGATCGCCGGCAACTGGAAGATGAACGGCCTCAAGGCCTCGATGAGCGAACTCGGGGCGATCGCCCAGGGCGCCTCGGATCTCTGGCGCAAGGCGGACCTGCTGATCTGCCCCCCGGCGACCTTGCTGTTCACGGCGGCGGCGGTGGTGATCGGCTCCAAGGTCGCGATCGGCGCGCAGGACTGCCATGCCGAGGCGTCCGGGGCCCATACCGGTGATATTTCGGCGGAAATGCTGGCCGATGCCGGGGCCAGCGCGGTGATCGTCGGCCATTCCGAGCGGCGCACCGACCATCACGAAACCGACGCCGTGGTGCGGGCCAAGGCCGAGGCGGCCTGGCGCGCGGGCCTGGTCGCGATCATCTGCGTCGGCGAGACGCAAGGCCAGCGCGACGCCGGCCAGACCCTCGATGTGGTCGGCACCCAGCTTGCCGGTTCGGTGCCGGACGGGGCCACCGCCGCCAATCTGGTGATCGCCTATGAGCCGGTCTGGGCGATTGGAACCGGCCTGACCCCGACCACCGGGGATGTCGAGCGGGTTCATGGTTTTATCCGGGAAACCCTCACCAAACGCCTGAAGGAGGAGGGGAGCCGGGTCCGCATCCTCTATGGCGGGTCGGTCAAGCCGTCCAACGCCGCCGAACTGATGGCGGTGCCGCATGTCAACGGCGCGCTGGTCGGCGGCGCCAGCCTCAAGGCCGCCGATTTTCTGGCGATCGCGGCGGGGTGTCCCTAG
PROTEIN sequence
Length: 252
MTDTSRPLIAGNWKMNGLKASMSELGAIAQGASDLWRKADLLICPPATLLFTAAAVVIGSKVAIGAQDCHAEASGAHTGDISAEMLADAGASAVIVGHSERRTDHHETDAVVRAKAEAAWRAGLVAIICVGETQGQRDAGQTLDVVGTQLAGSVPDGATAANLVIAYEPVWAIGTGLTPTTGDVERVHGFIRETLTKRLKEEGSRVRILYGGSVKPSNAAELMAVPHVNGALVGGASLKAADFLAIAAGCP*