ggKbase home page

SCN18_30_10_14_R3_B_scaffold_1430_20

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(19188..19427)

Top 3 Functional Annotations

Value Algorithm Source
Peptidase S24 n=2 Tax=Oligotropha carboxidovorans RepID=B6JDA1_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 79.0
  • Bit_score: 148
  • Evalue 1.70e-33
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 79.0
  • Bit_score: 148
  • Evalue 4.90e-34
Putative transcriptional regulatory protein {ECO:0000313|EMBL:AEI07953.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 79.0
  • Bit_score: 148
  • Evalue 2.40e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
GACTCGATGAAGCCGACCTATCGCGACGGCGACGTCATCGTGGTCTCGCCCGGCGCGCCGATCCGGCGCGGCGACCGCGTGGTGGTGAAGACCCGCGACGGCGAGGTGATGGTGAAGGAATTGCGCCGCCGCACCCAGAAGGTGATCGAACTGCAATCGCTCAATCCGGCGCATGCCGACCGCACCCTCTCCACCGCCGAGGTGGAATGGATCGCGCGCATCGTCTGGGCGAGTCAGTGA
PROTEIN sequence
Length: 80
DSMKPTYRDGDVIVVSPGAPIRRGDRVVVKTRDGEVMVKELRRRTQKVIELQSLNPAHADRTLSTAEVEWIARIVWASQ*