ggKbase home page

SCN18_30_10_14_R3_B_scaffold_6127_1

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 2..742

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V954_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 239.0
  • Bit_score: 368
  • Evalue 3.30e-99
Sulfite exporter TauE/SafE {ECO:0000313|EMBL:CEG08904.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 239.0
  • Bit_score: 369
  • Evalue 2.70e-99
putative transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 240.0
  • Bit_score: 329
  • Evalue 6.40e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGACCGATTTTCCGTTCGCCTCGTTCGGCATCTCCTCGCTGATCCTGTTCGGCGCCTACACGCTGTTCGGCATCACCGGCTTCGGCCAGAGCATCATCGCCATGCCCTTCCTGGTCATGGTCGCATCCCTGCGATTCTTCGTGCCGCTGGTGGCGTTGCTCGATGGCGTGTTCGTGATTTGGAACGTCGCCAAATTCCGCCGCGAGGCGAATTACCGCGAACTGATCGCGCTGCTGCCGACCACCACGGTCGGCATGATCGCCGGCGCGACCATCCTTCTGATCATCCCCGAGAAGATCCTGCTGCTCAGCCTCGGCGTGCTGATCACCTGCTACGGCGTCTACTGCATTCTGCAGCGCCATCAGGAGCGCCAGCTCAGCAAGATCGTGGCGGTGCCGCTCGGCCTGCTGGCCGGGGCGCTGTCGGCGACCTTCGGCACCGGCGGCCCGCTTTATGTGGCGTATCTGTCCGGCCGGATTCGCGACAAGGGCGAATTGCGCGCCACCATCGTGCAACTGCTGCTGCTCACCACGCTGCTGCGGATCGGCATCTTCGGTGTCGGCGGGCTCTACGCCGACCCGAAGATCTGGCTGTGGTGGGCGCTCGCGCTGCCGTTCTGCTTTGCCGGCGTCAAGCTCGGGCATTACCTGCACGACCGGCTGAAAAGCGAAAGCCTGTTGATGCTGGTCTATCTGATCCTGGTCGTGGCCGGGATCATGCTGGTCATCAAGAACGTTTAA
PROTEIN sequence
Length: 247
MTDFPFASFGISSLILFGAYTLFGITGFGQSIIAMPFLVMVASLRFFVPLVALLDGVFVIWNVAKFRREANYRELIALLPTTTVGMIAGATILLIIPEKILLLSLGVLITCYGVYCILQRHQERQLSKIVAVPLGLLAGALSATFGTGGPLYVAYLSGRIRDKGELRATIVQLLLLTTLLRIGIFGVGGLYADPKIWLWWALALPFCFAGVKLGHYLHDRLKSESLLMLVYLILVVAGIMLVIKNV*