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SCN18_30_10_14_R3_B_scaffold_7521_1

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 2..403

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 133.0
  • Bit_score: 231
  • Evalue 6.30e-58
2'-5' RNA ligase n=2 Tax=Bradyrhizobiaceae RepID=F7QGL4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 133.0
  • Bit_score: 231
  • Evalue 4.50e-58
2',5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 133.0
  • Bit_score: 218
  • Evalue 8.50e-55

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATCGACGGCTTCGCGGCGGGCGAGATCGCCGCGACGCTGGAGCGGGTCAACCGCAAGCCGTTCGAGGTCGAGGTGCAGGGTCTCGTCTCCTTCGGCGGCAAGAAACCGCGCGCGGTGGTCGCCACGGTGACGCCGACCCGGCCGTTGATGGAATTGCAGGCCGAACTGGAGCGGCTGATGCGCCGCTTCGGCTTCGACCCGGAGGGGCGCAAATTCACCCCGCATGTCACGCTGGCGCGGCTGCGCGACGCCGCGCCGCGCGATGTCGCCGACTACCTGTCGGTGCGCGGCTATTTCCCGACCCGCCGGTTCACCGCCGATCGCTTCGTGCTGTTCTCCTCGCGGGCCTCGGTCGGCGGGGGCCCTTACGTGGTCGAGGACGCCTATGCGCTGAGTGCCTGA
PROTEIN sequence
Length: 134
IDGFAAGEIAATLERVNRKPFEVEVQGLVSFGGKKPRAVVATVTPTRPLMELQAELERLMRRFGFDPEGRKFTPHVTLARLRDAAPRDVADYLSVRGYFPTRRFTADRFVLFSSRASVGGGPYVVEDAYALSA*