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SCN18_30_10_14_R3_B_scaffold_11288_3

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 901..1605

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07GX9_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 234.0
  • Bit_score: 433
  • Evalue 1.10e-118
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 234.0
  • Bit_score: 433
  • Evalue 3.00e-119
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABJ08805.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 234.0
  • Bit_score: 433
  • Evalue 1.50e-118

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGACCGCGCGCATTCTGGTGGTTGAGGACGAGGAAGCTCTGGCGACGCTGCTGAGCTACAATCTCGATGCCGAAGGCTACGAGGTCGAGACGGTGGCGCGCGGCGACGATGCCGACACAAGGCTGAAGGAGCGGCTGCCCGATCTCGTGGTGCTCGACTGGATGCTGCCCGGCCTGTCCGGCATCGAACTGTGCCGCCGCTTGCGGGCGCGAGCCGAGACGCGGCATCTGCCGATCATCATGCTGACCGCGCGCGGCGAGGAAAGCGAGCGGGTGCGCGGCCTTGCCACCGGCGCGGACGACTACATCGTCAAGCCGTTCTCGGTGCCGGAATTGCTGGCGCGGGTAAAGAGCCTGCTCCGCCGCGCCAGTCCCGAGCGGGTCGCCACCGTGCTCAACTACGGCGATATCGAGCTCGACCGCGAGAAGCGCCGCGTCGCGCGCTCCGGACGGCCGATTGATCTCGGCCCGACCGAATATCGCCTGCTGGAGTTCTTCCTCGAACACCCCGGCCGCGTCTTCAGCCGCGAGCAACTGCTCGACGGCGTCTGGGGCCGCGACATCTATATCGACGAGCGCACCGTGGACGTGCATATCGGCCGGCTGCGCAAGCTGCTCAATCCGGGCTCGGAGCCCGATCCGATCCGCACCGTGCGCGGCGCCGGCTACGCGCTCGACGACCGCTTCGTCAAGGCGGCGGAGTAG
PROTEIN sequence
Length: 235
MTARILVVEDEEALATLLSYNLDAEGYEVETVARGDDADTRLKERLPDLVVLDWMLPGLSGIELCRRLRARAETRHLPIIMLTARGEESERVRGLATGADDYIVKPFSVPELLARVKSLLRRASPERVATVLNYGDIELDREKRRVARSGRPIDLGPTEYRLLEFFLEHPGRVFSREQLLDGVWGRDIYIDERTVDVHIGRLRKLLNPGSEPDPIRTVRGAGYALDDRFVKAAE*