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SCN18_30_10_14_R3_B_scaffold_30126_1

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 24..716

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Afipia birgiae RepID=UPI0002E9CF38 similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 228.0
  • Bit_score: 425
  • Evalue 2.20e-116
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 228.0
  • Bit_score: 420
  • Evalue 9.70e-115
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 228.0
  • Bit_score: 418
  • Evalue 7.40e-115

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGGCTGTTGGAAAGAAGCTTGTGAAGGCCCGCGAGGGCATCGACCGCGAAAAGCTCTACCCGATCGCGGAAGCGGTGAAGCTCATCAAGGAGCGCGCCAAGGCGAAGTTCGACGAGACCATCGAGGTGGCGATCAATCTCGGCGTCGATCCGCGTCACGCCGACCAGATGGTGCGTGGCGTGGTCACGCTGCCGAACGGTACCGGCCGCACCCTGCGCGTCGGCGTGTTCGCGCGCGGCGCCAAGGCTGAAGAGGCCAAGGCCGCGGGCGCCGACGTCGTCGGCGCCGAGGAACTGGTCGAGAAGGTGCAGGGCGGCGCGATCGATTTCGACCGCTGTATCGCCACCCCCGACATGATGCCGCTGGTCGGCCGTCTCGGTAAGGTGCTCGGCCCGCGCGGCATGATGCCGAACCCGAAGATCGGCACGGTGACCATGGACGTCGCCGGCGCGGTCAAGGGCGCCAAGGGCGGCTCGGTCGAGTTCCGCGTCGAGAAGGCCGGCATCATCCAGGCCGGCATCGGCAAGGCCTCGTTCTCGGAAGAGAAGCTGGTGGAGAACATCAAGGCGCTGGCCGACGCGGTGGTGAAGGCCAAGCCCGCCGGCTCCAAGGGCACCTACGTCCAGCGGGTCGCGGTCTCTTCGACCATGGGTCCGGGCGTCAAGGTCGAGCCGGCCAGCGTTCTGAACTGA
PROTEIN sequence
Length: 231
MAVGKKLVKAREGIDREKLYPIAEAVKLIKERAKAKFDETIEVAINLGVDPRHADQMVRGVVTLPNGTGRTLRVGVFARGAKAEEAKAAGADVVGAEELVEKVQGGAIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKIGTVTMDVAGAVKGAKGGSVEFRVEKAGIIQAGIGKASFSEEKLVENIKALADAVVKAKPAGSKGTYVQRVAVSSTMGPGVKVEPASVLN*