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SCN18_30_10_14_R3_B_scaffold_37419_1

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(3..1286)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 428.0
  • Bit_score: 810
  • Evalue 6.20e-232
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 428.0
  • Bit_score: 806
  • Evalue 3.10e-231
DNA-directed RNA polymerase subunit beta n=3 Tax=Bradyrhizobiaceae RepID=F7QQ10_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 428.0
  • Bit_score: 810
  • Evalue 4.40e-232

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATCAACGATTTCTCCGGCACCTCGCAGCTCGAATTCGTGCGCTACGAGTTCGAACAGCCGAAATACGACGTCGACGAGTGCCGCCAGCGCGGCATGACCTTCGCTGCGCCGCTCAAGGTGACGCTGCGCCTCATCGTGTTCGATATCGACGAGGAAACCGGCGCCAAGTCGGTGAAGGACATTAAGGAGCAGGACGTCTACATGGGCGACATCCCGCTCATGACCATGAACGGCACCTTCATCGTCAACGGCACCGAGCGCGTCATCGTCTCGCAGATGCACCGCTCGCCGGGCGTGTTCTTCGATCACGACAAGGGCAAGACCCATTCGTCGGGCAAGCTGCTGTTCGCCGCCCGCGTCATTCCCTATCGCGGCTCCTGGCTCGACATCGAGTTCGACGCCAAGGACATCGTGTTCGCGCGCATCGACCGTCGCCGCAAGATTCCGGTGACGTCGCTGATGTATGCGCTGGGTCTCGACGGCGAGGAAATCCTCTCGATCTTCTACAAGAAGATCCAGTACAAGCGCACCAAGGACGGCTGGCGCGTGCCGTTCTCGGCCGAGCGCTTCCGCGGCTACACCGCCGCGACCGACCTGATCGACGCCGATTCCGGCAAGGTGGTGCTCGAGGCCGGCAAGAAGCTGACCGTGCGCGCCGCTCGCCAGTTGCAGGAAAAGGGTCTCAAGGCGCTGCGCATGACCGACGAGGATCTCGTCGGCATGTACCTCGCCGAGGACCTCGTCAATCCGAAGACCGGCGAAATCCACGCCGAGGCCGGCGAGGAGATCACCGAAAAGCTGCTCAAGGCGCTGAACGAGACCGGCTACAAGGAATTGCCGATCCTCGACATCGATCACGTCAACGTCGGTCCCTACATCCGCAACACGCTCTCCGCCGACAAGAACATGACGCGCGAGGACGCGCTGTTCGACATCTACCGCGTGATGCGCCCGGGCGAGCCGCCGACCCTCGACTCGGCGCAGAACATGTTCCAGTCGCTGTTCTTCGACGCCGAGCGCTACGACCTTTCGGCCGTGGGCCGCGTCAAGATGAACATGCGCCTCGAGCTCGATGCGCCAGACACCCACCGCACGCTGCGCAAGGAAGACATCCTCGCCGTCATCAAGACGCTGGTGGACCTGCGCGACGGCAAGGGCGAGATCGACGACATCGACCATCTCGGCAACCGCCGCGTCCGTTCGGTCGGCGAGCTGATGGAAAATCAGTACCGCGTCGGTCTCCTGCGCATGGAGCGCGCCATCAAGGAGCGCATGTCGAGCGTC
PROTEIN sequence
Length: 428
INDFSGTSQLEFVRYEFEQPKYDVDECRQRGMTFAAPLKVTLRLIVFDIDEETGAKSVKDIKEQDVYMGDIPLMTMNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAARVIPYRGSWLDIEFDAKDIVFARIDRRRKIPVTSLMYALGLDGEEILSIFYKKIQYKRTKDGWRVPFSAERFRGYTAATDLIDADSGKVVLEAGKKLTVRAARQLQEKGLKALRMTDEDLVGMYLAEDLVNPKTGEIHAEAGEEITEKLLKALNETGYKELPILDIDHVNVGPYIRNTLSADKNMTREDALFDIYRVMRPGEPPTLDSAQNMFQSLFFDAERYDLSAVGRVKMNMRLELDAPDTHRTLRKEDILAVIKTLVDLRDGKGEIDDIDHLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSV