ggKbase home page

SCN18_30_10_14_R3_B_scaffold_40081_2

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 933..1217

Top 3 Functional Annotations

Value Algorithm Source
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 95.0
  • Bit_score: 180
  • Evalue 9.10e-43
ATP-dependent protease La (EC:3.4.21.53) similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 95.0
  • Bit_score: 179
  • Evalue 4.10e-43
Lon protease n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215J0_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 95.0
  • Bit_score: 179
  • Evalue 1.40e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGACTGCCTCCAAGCCTCGTCCACCTATCGTTTCCGGCGAAAGCCACTCCTATCCGGTGTTGCCGCTGCGCGACATCGTCGTCTTCCCGCATATGATCGTGCCGCTGTTCGTCGGCCGCGAGAAATCCATTCGTGCGCTCGAAGACGTGATGAAGAACGACGCGCTGATCCTGCTCGCGACGCAGAAGAATGCGTCGGACGACGATCCGTCGCCGGACTCGATCTATGAGATCGGCACGCTCGCCAGCGTGTTGCAGCTCCTCAAACTGCCCGACGGCACCGTG
PROTEIN sequence
Length: 95
MTASKPRPPIVSGESHSYPVLPLRDIVVFPHMIVPLFVGREKSIRALEDVMKNDALILLATQKNASDDDPSPDSIYEIGTLASVLQLLKLPDGTV