ggKbase home page

SCN18_30_10_14_R3_P_scaffold_982_4

Organism: SCN18_30_10_14_R3_P_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_61

near complete RP 48 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(4283..5149)

Top 3 Functional Annotations

Value Algorithm Source
Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FI28_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 269.0
  • Bit_score: 373
  • Evalue 1.20e-100
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:KFC66857.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 287.0
  • Bit_score: 429
  • Evalue 3.40e-117
hydroxymethylglutaryl-CoA lyase similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 284.0
  • Bit_score: 347
  • Evalue 2.60e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGGCGGGGCGCGAGGTCGTCATCGTCGAGGTCGGTCCGCGCGACGGCCTGCAGAACGAGACGACACCGATCACGACTGCCGACAAGCTCGCCTTGATCGGCAGGCTGGCGGAGGCCGGCCTCTCCCGCATCGAGGCGACGGCCTTCGTCTCGCCGCGCTGGGTGCCGCAAATGGCCGACCATGAGGCGGTGATGCGTGGCATCACCCGCCGGCCGGGCGTCGTCTATTCGGCCCTGGTCCCGAACGAGAAGGGAGCCGAGGCCGCGCTTGCCGCAGGCGCGCAGGCGCTCGCCGTGTTCACGGCGGCCTCGGAAAGCTTCTGCCGGAAGAACACCAATTGCTCGATCGCCGAGAGCATTGCGCGCTTCCGGCCTGTGATGAGGCTGGCGGAACGCGCCGGAGTGCCGGTCCGCGGCTATGTCTCCTGCGCGCTGGATTGTCCCTATGAGGGAGAGATCGCACCAGATGCGGTCGCTTCCGTCTCGGCCGAGCTTCTGGCGCTCGGCTGCAGCGAGATCGCACTCTCCGACACGCTGGGGCGCGGCACGCCGGAGCGGACGCAGGCGATGGTCGAGGCAACGCTGAGGCGCGCGCCGGCGGCCATGCTCGCCGGGCATTTCCACGACACTTCGGGCCAGGCGATCGCCAATGTCGAGGTGGCCTGGCGGCTCGGCCTACGCATCTTCGACGGCGCGGTCGGCGGCTCCGGCGGCTGCCCCTATGCACCCGGCGCCGCCGGCAATCTGGCGACCGAACGCCTCGTCGCGCATTTCGAAGCGAAAGGTATCTCGACCGGCATCGACCTCGCGGCACTGGAACGGGCGGGACGATGGATCGGCGCGCGCCTGGACATGGCGGCCCGGTAG
PROTEIN sequence
Length: 289
MAGREVVIVEVGPRDGLQNETTPITTADKLALIGRLAEAGLSRIEATAFVSPRWVPQMADHEAVMRGITRRPGVVYSALVPNEKGAEAALAAGAQALAVFTAASESFCRKNTNCSIAESIARFRPVMRLAERAGVPVRGYVSCALDCPYEGEIAPDAVASVSAELLALGCSEIALSDTLGRGTPERTQAMVEATLRRAPAAMLAGHFHDTSGQAIANVEVAWRLGLRIFDGAVGGSGGCPYAPGAAGNLATERLVAHFEAKGISTGIDLAALERAGRWIGARLDMAAR*