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SCN18_14_9_16_R2_B_scaffold_43_24

Organism: SCN18_14_9_16_R2_B_SCNPILOT_CONT_500_BF_Rhizobiales_63_22_63_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: 28283..28942

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q217L0_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 208.0
  • Bit_score: 182
  • Evalue 3.00e-43
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 208.0
  • Bit_score: 182
  • Evalue 8.60e-44
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABD87426.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 208.0
  • Bit_score: 182
  • Evalue 4.20e-43

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGCTGGAAAAGAAGATTCGAAGGGGCCGTCCCAAGGTCAAGTCCGACGCGGAACGCAGCACCGAGATCGCGCGGTGTGCGAGCAGTCTCTTCATCCTCCATGGCTATGCGGATGTGACGATGGACGACATCGCCGCCGCCTGCCACATCTCCAAGCGCACGCTCTATGCCCTATTCAGGAGCAAAGCCGATATTTTCGGCAGGGCGATCGACGACCATCGGCGCAGCATGCTCGACCTTCCAGGCGATTATGACGACATGCCCATCGCCGAGGCGCTGGGCAGAATCTTCCGCATCGACCTCAGCGCGGCGGAAGATCACGAGCGTCTCGCCGTCGTGAGAATGGTCCGCCTGGAAGGAGCGCGTTTTCCCGAACTGGAGACGATGCTGCGCGAGCGCGGCGGCGAGCACTCCCGCAAGCTGCTCGCCGAATGGCTGGAACGCCAGAAGCGCGCCGGACGCATCGATATCGGCAATACTTGGTTCGCGGCGAAGACACTGATGGACATGATCTTCGGCGCAATCATCGCCAAGGGCGCGCACGGCGAGGTGCGCTGGCCCTCCGACGAGGAGCGCCGGGCCTATCTCAAGCAGTGCATCGCGATCTTTACCGTCGGCACATTGCCGGCCGACAGCCCCGAACGTTCCCGTTCGACCTGA
PROTEIN sequence
Length: 220
MLEKKIRRGRPKVKSDAERSTEIARCASSLFILHGYADVTMDDIAAACHISKRTLYALFRSKADIFGRAIDDHRRSMLDLPGDYDDMPIAEALGRIFRIDLSAAEDHERLAVVRMVRLEGARFPELETMLRERGGEHSRKLLAEWLERQKRAGRIDIGNTWFAAKTLMDMIFGAIIAKGAHGEVRWPSDEERRAYLKQCIAIFTVGTLPADSPERSRST*