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SCN18_14_9_16_R2_B_scaffold_561_4

Organism: SCN18_14_9_16_R2_B_SCNPILOT_CONT_500_BF_Rhizobiales_63_22_63_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: comp(2231..2956)

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family protein n=2 Tax=Ochrobactrum intermedium RepID=C4WKE5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 246.0
  • Bit_score: 389
  • Evalue 1.40e-105
Rhomboid family protein {ECO:0000313|EMBL:ELT51180.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 246.0
  • Bit_score: 389
  • Evalue 1.90e-105
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 238.0
  • Bit_score: 388
  • Evalue 1.10e-105

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGAGCAATTCCGGACCGGAGCGTCAGAGCGGGCGTGAGCCGGTTTTCAACATTCCGGGCGTGGTGCTCGCGCTGATCGGCCTCAACGTGGCGGTCTATATCTACCAGAACTATGTCGCCACGCCGGACCAGAATTATGCCTTCGTGCTCAATTTCGCGCTGATCCCGAAGCGGCTTTCGATCGATGGCGGTTTCACCGATCCGGCGGCGCTGTTCACGCTGCTGAGCTATTCCTTCATGCATGGCGGCATCATGCACATCGCCGTCAACATGATCTGGTTCGCCGCTTTCGGCTCGCCGCTGGCGGGCCGTATCGGCGCGTTGCGCATGTCGCTGTTCTGGATCGTCACGGCCGTCGTCGCCGGGTTGACGCATTATGCTATCTATCCGCAGAGCCTCTCGCCGCTGGTCGGCGCTTCGGGCGCGATTTCCGGCATGATGGGGGCCGCCGCCCGCTACGGCTTCCGCCGTGTCGGTCACGGACGGCGCTCGGAATTCGCCGGGCCGGTGCTGCCCATCGGTCTGACGTTGACGCTGAAACCCGTACTGGTGTTCGTCGGTGTCTGGTTCGTGGTCAATATCGCCACCGGGCTTTATTCGACCGGCGGGACCGACCTGTCCGGCATCGCATGGGAGGCGCATATAGGCGGCTTCCTCGCCGGCTTCCTCGTGATCCCGCTGCTCGACCGTCCGCGCGGCTATGATGCCGTATTGTTGCGGCGTTAG
PROTEIN sequence
Length: 242
MSNSGPERQSGREPVFNIPGVVLALIGLNVAVYIYQNYVATPDQNYAFVLNFALIPKRLSIDGGFTDPAALFTLLSYSFMHGGIMHIAVNMIWFAAFGSPLAGRIGALRMSLFWIVTAVVAGLTHYAIYPQSLSPLVGASGAISGMMGAAARYGFRRVGHGRRSEFAGPVLPIGLTLTLKPVLVFVGVWFVVNIATGLYSTGGTDLSGIAWEAHIGGFLAGFLVIPLLDRPRGYDAVLLRR*