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SCN18_14_9_16_R2_B_scaffold_402_17

Organism: SCN18_14_9_16_R2_B_SCNPILOT_CONT_500_BF_Rhizobiales_63_22_63_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: comp(18819..20489)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 553.0
  • Bit_score: 962
  • Evalue 2.20e-277
putative 2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 553.0
  • Bit_score: 957
  • Evalue 1.40e-276
2-isopropylmalate synthase n=1 Tax=Rhizobium lupini HPC(L) RepID=K5CW77_RHILU similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 553.0
  • Bit_score: 959
  • Evalue 1.30e-276

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1671
ATGCTGCAAAATCCAGAAACCAAATACCGCCCCTTCGCCTCTCCCGTGGACCTGCCGGACCGCACCTGGCCGTCGAACCGGCTCACCAAGGCGCCGCGCTGGCTTTCGACCGATCTGCGCGACGGCAATCAGGCGCTCGCCGATCCGATGGATGTCGGGCGCAAGCTGCGCTTCTACGACATGCTGCTCGATATCGGCTTCAAGGAAATAGAGGTGGCCTTTCCATCGGCGTCCCGCACCGAATTCGATTTCATGCGGGCGCTGATCGAGGAAAACCGCATTCCGGACGACGTGACGATTCAGGTTCTGACGCAGTCGCGCGCCGACCTGATCGCACGGACCTTCGAGTCGCTCGACGGCGCGAAACGGGCGATCGTCCATCTCTACAATGCGACCGCGCCGCTGTTCCGGCGTGTCGTGTTCGGGATGGACCGGCACGAGATCGTCGATCTCGCCGTCACCGGCGTCACCGCGATGCTGGAGGAGAGCCTGAAACGCCCCGACACGGAATGGACCTTCGAATATTCGCCGGAGACGTTCTGCTTCACCGAGCCGGATTTCGCGCTGGAGATTTGCGAACGGGTGCTCGATGTGTGGCGCCCGACGCCGGAACGCCCGGCGATCCTAAACCTGCCGGCAACGGTGGAGGTCGCCATGCCCAATATCTATGCCGATCAGATCGAATGGTTCTGCCGGCATATTTCGCGTCGCGATGCCGTGGTCATCAGCGTGCATCCGCACAACGATCGCGGAACCGCCGTGGCATCCGCCGAACAGGCTTTGCTTGCCGGGGCCGACCGTGTCGAAGGCTGCCTGTTCGGCAATGGCGAGCGCACCGGCAATGTCGATCTGGTGACGCTGGCGCTCAATCTCTACACGCAGGGCATCGACCCCGGACTGCGGTTCCCGGCGATCCGCTCGGTCGTGGACACGGTGCAGCATTGCAACGGCCTGCCGGTGCATCCGCGCCATCCCTATGCGGGCGAACTGGTGCATACCGCCTTTTCCGGTTCGCATCAGGATGCGATCAGGAAGGGCTTCGCCGCCCATCGCGCGCGCAATGACGGCATCTGGGAAATGCCCTATCTGCCCATCGATCCGGCCGATCTCGGCGAAACATACGAGGCCGTGATCCGCGTCAACAGCCAGTCGGGCAAGGGCGGCGTGGCATGGGTGATCGAGCGGGACAGGGGGCTGAAGCTGCCGCGTCCGTTGCAGGTCGATCTCAGCCGCCGGGTGCAGGAATTCGCCGACCGGAGCGGCAAAGAAATCACCGCCGACGCCATCTGGTCGATTTTTCAGGAAGCCTATCGTCTGACGGGTCCGCAGCCGTTCGAACTGGTCAGCTATCGGGACACGGCGCCGCGCAGGGCCGGCGAGCCGCGCGTCTTTGCCGGCCGTATTCGTCATCGCGGCGGGGAGGTTGCCGTGATGGGCCGCGGCAACGGCCTGATTTCCGGCGCGGTCGCGGCGATCGCTGAGGGCTTCGGCCTGGCGCTGGAAGTGGTCGATTACCATGAACACGCGCTCAAGCGCGGTGCGGACGCCGAGGCCGTCGCCTATCTCGAATGCTGCACATCCGATGGCCGGACGGTTTTCGGCGTCGGCATCGACGGCAATGTCGCCACGGCCTCGGTCAAGGCGGTATTGAGCGCCGCCGCCGGCGCTTGA
PROTEIN sequence
Length: 557
MLQNPETKYRPFASPVDLPDRTWPSNRLTKAPRWLSTDLRDGNQALADPMDVGRKLRFYDMLLDIGFKEIEVAFPSASRTEFDFMRALIEENRIPDDVTIQVLTQSRADLIARTFESLDGAKRAIVHLYNATAPLFRRVVFGMDRHEIVDLAVTGVTAMLEESLKRPDTEWTFEYSPETFCFTEPDFALEICERVLDVWRPTPERPAILNLPATVEVAMPNIYADQIEWFCRHISRRDAVVISVHPHNDRGTAVASAEQALLAGADRVEGCLFGNGERTGNVDLVTLALNLYTQGIDPGLRFPAIRSVVDTVQHCNGLPVHPRHPYAGELVHTAFSGSHQDAIRKGFAAHRARNDGIWEMPYLPIDPADLGETYEAVIRVNSQSGKGGVAWVIERDRGLKLPRPLQVDLSRRVQEFADRSGKEITADAIWSIFQEAYRLTGPQPFELVSYRDTAPRRAGEPRVFAGRIRHRGGEVAVMGRGNGLISGAVAAIAEGFGLALEVVDYHEHALKRGADAEAVAYLECCTSDGRTVFGVGIDGNVATASVKAVLSAAAGA*