ggKbase home page

SCN18_14_9_16_R2_B_scaffold_402_18

Organism: SCN18_14_9_16_R2_B_SCNPILOT_CONT_500_BF_Rhizobiales_63_22_63_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: 20792..21652

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding domain-containing protein, AraC-type n=1 Tax=Rhizobium sp. IRBG74 RepID=U4PZT5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 243.0
  • Bit_score: 323
  • Evalue 1.10e-85
Transcriptional regulator, AraC family {ECO:0000313|EMBL:KIV66184.1}; TaxID=1604021 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. UR51a.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 243.0
  • Bit_score: 325
  • Evalue 5.30e-86
DNA-binding domain-containing protein, AraC-type similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 243.0
  • Bit_score: 323
  • Evalue 3.10e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGGTTCTGGAACGCCTGCTCGATGTGACGGACGGCTTTGCGGTGGTCGCGCAGGACGGGAATCGCCGCCCCGGCGAGAGGCACAGCCATGACCGCGCGCAACTGCTTTATGCGATCAGCGGCGTCATCTCGGTCACGACGGATCGAGGAACATGGGTCGTGCCGCCGAGCCGGGCGGTCTGGCTTCCGGCCGATATGGAGCACGAAACCACCGGCAGTTCCGGCGTCCGTTTCCGTTCGCTGCTGATCGAAACGGGGCGTATTCCCGATCCGCCCGGAACCTGCATGGTGGTTGAGGTCACGCCGCTCCTGCGGGAACTGATCCAGAAGCTCGTGAGCATCGCCGAAGGCGGAGGGGGCGGTGCTATCGCCGAAGCCGTGGTGCGCCTGCTCGTGCTGGAACTGTCCTTCATGCCGGTGCGGGCGCTCAACCTGCCGATGCCGGAGCATGGCGGGCTGGCGCGGTTCTGCGGCCGGCTTCGCGGCGATCCGGCGTCCAGCCTCACCGTGGAGGACGCGGCCGCGGCGCTGCATATGAGCCGCGCGACTTTCATGCGGCTGTTCCGGCGCGAAACAGGCATGAGCTTCGGGCGGTGGCGGCAGCAGGCGCGGATGCTCCATGCCCTGTCGCTGCTGGCCGAAGGGCGCAACATTCTCGATGTCGCGCTCGAATGCGGTTATGAGAGCCCGAGCGCCTTCTCCGCCATGTTCCGCCGGTCCCTCGGCCAGCCACCGAGCGCATATTTCGGGCACCGGCCCATGCAGGCGCGGGTCGCCAAAGCATTTCCAGCGAAAGTGCGAAACGGTTTCGCGCAGGACGATGTGCAAAACGAAAATCCAAAGCGCGGAAAGCGAATCTGA
PROTEIN sequence
Length: 287
MVLERLLDVTDGFAVVAQDGNRRPGERHSHDRAQLLYAISGVISVTTDRGTWVVPPSRAVWLPADMEHETTGSSGVRFRSLLIETGRIPDPPGTCMVVEVTPLLRELIQKLVSIAEGGGGGAIAEAVVRLLVLELSFMPVRALNLPMPEHGGLARFCGRLRGDPASSLTVEDAAAALHMSRATFMRLFRRETGMSFGRWRQQARMLHALSLLAEGRNILDVALECGYESPSAFSAMFRRSLGQPPSAYFGHRPMQARVAKAFPAKVRNGFAQDDVQNENPKRGKRI*