ggKbase home page

SCN18_14_9_16_R2_B_scaffold_484_13

Organism: SCN18_14_9_16_R2_B_SCNPILOT_CONT_500_BF_Rhizobiales_63_22_63_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: comp(13501..14844)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE8BA1 related cluster n=1 Tax=unknown RepID=UPI0003CE8BA1 similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 439.0
  • Bit_score: 482
  • Evalue 3.80e-133
Hemolysin D {ECO:0000313|EMBL:ESY75369.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 439.0
  • Bit_score: 482
  • Evalue 5.30e-133
HlyD family type I secretion membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 423.0
  • Bit_score: 464
  • Evalue 3.00e-128

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1344
ATGGCTGACAATCGATCGAGTACCGTGGCTGACCGCCGGGTTCGTTGGGAAGACCAGATTTGCTCCGGCCGACGCAGGCTCTCATATGCGGGTTATCTGTCGATCGCCCTGCTCGCCGGCGGTTTCGGCTACTGGGCGACGACGGCGCCGATCGCGCGGGCGGCTGTCGCCCATGGCGTGATCGCCGCAGCCGGCCGCAACGTCATGATCCAGCATCCCGAGGGAGGCGTCATCCAGCGGGTTCTTGTGCGCGAGGGCGATCATGTGAGGGCGGGGCAGGATTTGTATATCCTCGACCCGACGGCGGCCCAAACCAATGTCAACCGGCTGGGCAAGCAGATCGTATCCCTGAAAGCCAGGCTGCTGCGTCTGGCGGCCGAGCGCGACGGAGCGCGGGAATTGAACCTGCCATCGGCTGCGGTGCTTGGGCCGGGACTGGATGATATCGACGAACTGATCGTCGAGCAGCACAAGGAATTCGCTGCGCGGCTTTCCCGTTTCGTGTCCGAGCAGGAGATTCTTTACCAGCGGGTAGCGACGCTCGATGAAACCGCCGAAGGCCTGAAAGCGCAGAAAGCCGCCATCGGCGGGCAACTGGCCATCGTCAGGATCGAACTCGACCGCAAGAAGAGGCTGGTCGATCAGGGGCTGACCAATGTGTTCGAGTATACCCAGATCCAGCGCAATGAAGCCGATCTGATGGGACGAGCCGGCGCGATTGACTCCCAATTGAGCGCGAATGCGACGCAGACCATCGAAGCCAGGGAGCAGATCGAACGCATCAAGACCCAGCGCGTCGAACAGGCCGTGACGGCTCTGAACGAAGTCCGCGCCCAACTGGCCGATGCCGAGGAGCAGTTCAACGCCGCGAAAGCAGTTCTTTCACGGACCGTCATCAAGGCCCCGAGCGACGGCATCATCGTCTCGATGACCTATAACACAGTCGGCAGTGTTATCGGGCCGGGCGAAAAAGTCATCGAAATCCTGCCGACATCCGATCGTCCGATTGTCGAGGCGAAACTCAGCCCGCAGGAGATCGACGCCGTTCACATCGGCCAACCCGCCCGGTTGCGCCTCACGGCACTCAACGCACGGCTGACGCCGGAGGTTGGGGGCGTTATCACCGATATTTCCGCCGACAGGCTGGTCGATCAGACGACGCACGAGGTTTATTACCGCGCCCGCCTGCGTTTTGCCGACGAACTGCCGCCGGGTGTCATGGCTGAACAGCTTTATCCCGGCATGCCGGTTGAAGCCTATATCGATGCCGGTGAGCGGACTTTCTTCGGTTATCTCGTCCGGCCAATTCGGGATTCGCTCAGCAGGGCGCTCAAGGAAGAGTGA
PROTEIN sequence
Length: 448
MADNRSSTVADRRVRWEDQICSGRRRLSYAGYLSIALLAGGFGYWATTAPIARAAVAHGVIAAAGRNVMIQHPEGGVIQRVLVREGDHVRAGQDLYILDPTAAQTNVNRLGKQIVSLKARLLRLAAERDGARELNLPSAAVLGPGLDDIDELIVEQHKEFAARLSRFVSEQEILYQRVATLDETAEGLKAQKAAIGGQLAIVRIELDRKKRLVDQGLTNVFEYTQIQRNEADLMGRAGAIDSQLSANATQTIEAREQIERIKTQRVEQAVTALNEVRAQLADAEEQFNAAKAVLSRTVIKAPSDGIIVSMTYNTVGSVIGPGEKVIEILPTSDRPIVEAKLSPQEIDAVHIGQPARLRLTALNARLTPEVGGVITDISADRLVDQTTHEVYYRARLRFADELPPGVMAEQLYPGMPVEAYIDAGERTFFGYLVRPIRDSLSRALKEE*