ggKbase home page

SCN18_14_9_16_R2_B_scaffold_735_6

Organism: SCN18_14_9_16_R2_B_SCNPILOT_CONT_500_BF_Rhizobiales_63_22_63_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: comp(3945..5249)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Rhizobium radiobacter RepID=UPI00035D0EF1 similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 433.0
  • Bit_score: 690
  • Evalue 6.80e-196
ABC transporter permease {ECO:0000313|EMBL:EPR10876.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 433.0
  • Bit_score: 690
  • Evalue 9.50e-196
livM; High-affinity branched-chain amino acid transport system permease protein livM similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 427.0
  • Bit_score: 618
  • Evalue 1.20e-174

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGAAAGACAACCGCCTGTTCGCGCTTTGCAAGGAAGCGCTTCTCACCTTCACCATAGCGCTGATCCTGCTCGGGCCGATCTGCGGCATCGTGCTGGACGGCTTCAGCTTCCGCAACGAGTTGTGGCGCGCCGTCGCGCTCGCCGCTGTCGTCACCGCCGGCCGCATCGTGCTGTCGCTGATCGGCATGAGCCCGCTCGGCCGGCGGCTCAAAGCCGTCCTCGCCCGCAACAGCGGCGGCGTCACGGTCAGGACGGGCCGGGAGAAATCGGCCGCGCCGCTGCTGGCGCTCGTCTTCCTGCTCGGCCTCGCCGTGCCCTTCGTCGCCGACAAATATTTCCTGAGCGTCGCCATTCTGGCGCTGATCTATTGCCTGCTCGGCCTCGGTCTCAATATCGTCGTGGGTCTCGCGGGGCTGCTCGATCTCGGCTACGTGGCGTTCTATGCGGTCGGGGCCTATCTTCTGGCGCTCGGCTCGCAATATCTGGGTCTCGGCTTCTGGAGCGCGCTGGTCATCGCGCCGTTCCTCGCCGGCCTGTTCGGCATGATCCTCGGCTTCCCGGTGCTGAAGATGCACGGCGATTATCTCGCCATCGTCACGCTCGGCTTCGGCGAGATCATCCGCCTCGTGCTCAACAACTGGCTGAGTTTGACCGGAGGTCCGAACGGAGCGGAGGTGCCGCCGCCCACTTTCCTCGGGCTGGAATTCACCCGCGCGGCCCGGCAGGGCGGCGAGCCTTTCCACAAGTTCTTCGGCATCGCCTACAGTGCCGACTACAAGTTCTGGTTTCTCTGGTTCGTGCTGATCCTCGTGGTCTGCGGCGTGATCTACGTGGTCGAGCGCCTGCGCGTCATGCCGCTCGGCCGCATGTGGGAGGCGTTGCGCGAGGACGAGATCGCCTGCCGGTCGCTCGGCGTCAATCACGTCTTCATCAAGCTGTCCGCCTTCATGCTGGGCGCATCCACGGGCGGGCTGGCCGGCGTGTTCTTCGCCGCGCAGCAGGGCTTCGTGAACCCGACCTCCTTCACCTTCTTCGAATCCGCGCTGATCCTCGCCATCGTTGTGCTGGGCGGTCTCGGATCGACGGTCGGCGTCATTTTCGCCGCGCTGGTGCTGACCGTGCTGCCGGAACTGCTGCGCGATTTCGCCGAATATCGCGTGTTCATCTTCGGCGTGCTGATGGTGGTGATGATGATCTGGAAACCGCGCGGGCTTGTGCGCATCAGGCGTCCGGCCTTTTTCCCGTCCGGCGCGTCCGTCAACCCCGTGCCCGCCGCGGCGCCGGCCACGGAGGCGGCACGATGA
PROTEIN sequence
Length: 435
MKDNRLFALCKEALLTFTIALILLGPICGIVLDGFSFRNELWRAVALAAVVTAGRIVLSLIGMSPLGRRLKAVLARNSGGVTVRTGREKSAAPLLALVFLLGLAVPFVADKYFLSVAILALIYCLLGLGLNIVVGLAGLLDLGYVAFYAVGAYLLALGSQYLGLGFWSALVIAPFLAGLFGMILGFPVLKMHGDYLAIVTLGFGEIIRLVLNNWLSLTGGPNGAEVPPPTFLGLEFTRAARQGGEPFHKFFGIAYSADYKFWFLWFVLILVVCGVIYVVERLRVMPLGRMWEALREDEIACRSLGVNHVFIKLSAFMLGASTGGLAGVFFAAQQGFVNPTSFTFFESALILAIVVLGGLGSTVGVIFAALVLTVLPELLRDFAEYRVFIFGVLMVVMMIWKPRGLVRIRRPAFFPSGASVNPVPAAAPATEAAR*